[INFO] crate hdf5-derive 0.6.1 is already in cache [INFO] checking hdf5-derive-0.6.1 against try#85cc1486e1f000dce4bb8e1b3cfab2b654b102a8 for pr-73323 [INFO] extracting crate hdf5-derive 0.6.1 into /workspace/builds/worker-14/source [INFO] validating manifest of crates.io crate hdf5-derive 0.6.1 on toolchain 85cc1486e1f000dce4bb8e1b3cfab2b654b102a8 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+85cc1486e1f000dce4bb8e1b3cfab2b654b102a8" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-derive 0.6.1 [INFO] finished tweaking crates.io crate hdf5-derive 0.6.1 [INFO] tweaked toml for crates.io crate hdf5-derive 0.6.1 written to /workspace/builds/worker-14/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+85cc1486e1f000dce4bb8e1b3cfab2b654b102a8" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+85cc1486e1f000dce4bb8e1b3cfab2b654b102a8" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+85cc1486e1f000dce4bb8e1b3cfab2b654b102a8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 98fae0817394758fff94f58fa7f1c8df8044bf351683bca270d106b101dcc326 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "98fae0817394758fff94f58fa7f1c8df8044bf351683bca270d106b101dcc326", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "98fae0817394758fff94f58fa7f1c8df8044bf351683bca270d106b101dcc326", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "98fae0817394758fff94f58fa7f1c8df8044bf351683bca270d106b101dcc326", kill_on_drop: false }` [INFO] [stdout] 98fae0817394758fff94f58fa7f1c8df8044bf351683bca270d106b101dcc326 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+85cc1486e1f000dce4bb8e1b3cfab2b654b102a8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 80ab4608f45dfa8fc550239a13c7fb7499bd7fefac54738aab2b4a9cce18b8d3 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "80ab4608f45dfa8fc550239a13c7fb7499bd7fefac54738aab2b4a9cce18b8d3", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.18 [INFO] [stderr] Compiling libc v0.2.72 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling libloading v0.6.2 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Checking termcolor v1.1.0 [INFO] [stderr] Checking glob v0.3.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Checking lock_api v0.3.4 [INFO] [stderr] Checking num-integer v0.1.43 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Checking quote v1.0.7 [INFO] [stderr] Checking parking_lot_core v0.7.2 [INFO] [stderr] Checking hdf5-types v0.6.1 [INFO] [stderr] Checking syn v1.0.34 [INFO] [stderr] Checking parking_lot v0.10.2 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Checking hdf5-derive v0.6.1 (/opt/rustwide/workdir) [INFO] [stderr] Compiling hdf5-sys v0.6.1 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling hdf5-derive v0.6.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-e43ff975ee9164ff/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x555bc34fd2c5 - backtrace::backtrace::libunwind::trace::h34afbfad7fd770fc [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x555bc34fd2c5 - backtrace::backtrace::trace_unsynchronized::h460d522b1619a600 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x555bc34fd2c5 - std::sys_common::backtrace::_print_fmt::ha45fac10086813b4 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x555bc34fd2c5 - ::fmt::hde84f63fcfd0e6de [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x555bc3520c9c - core::fmt::write::h540ac4a6a1232abc [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x555bc34f9fe2 - std::io::Write::write_fmt::hc344eafd6e850b4d [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x555bc34ff7e0 - std::sys_common::backtrace::_print::h4db88ff15cb5d61d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x555bc34ff7e0 - std::sys_common::backtrace::print::h5fc39e1b1f610bd3 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x555bc34ff7e0 - std::panicking::default_hook::{{closure}}::h59e55edacb1d974a [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x555bc34ff52c - std::panicking::default_hook::heee4c8016dfbf328 [INFO] [stderr] at src/libstd/panicking.rs:217 [INFO] [stderr] 10: 0x555bc34ffe23 - std::panicking::rust_panic_with_hook::h8405b6301c79fb5a [INFO] [stderr] at src/libstd/panicking.rs:526 [INFO] [stderr] 11: 0x555bc330e689 - std::panicking::begin_panic::h3cf4d82435906387 [INFO] [stderr] at /rustc/85cc1486e1f000dce4bb8e1b3cfab2b654b102a8/src/libstd/panicking.rs:456 [INFO] [stderr] 12: 0x555bc32de4cc - build_script_build::LibrarySearcher::try_locate_hdf5_library::hd4f4242bf620de64 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523 [INFO] [stderr] 13: 0x555bc32df87c - build_script_build::main::h1c51a676382532b5 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:601 [INFO] [stderr] 14: 0x555bc32ea1eb - std::rt::lang_start::{{closure}}::h8017268f7e80e029 [INFO] [stderr] at /rustc/85cc1486e1f000dce4bb8e1b3cfab2b654b102a8/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x555bc35001f3 - std::rt::lang_start_internal::{{closure}}::h7cea099ad4edf1eb [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x555bc35001f3 - std::panicking::try::do_call::h42d93372c44025d2 [INFO] [stderr] at src/libstd/panicking.rs:348 [INFO] [stderr] 17: 0x555bc35001f3 - std::panicking::try::hb47a4182362d3341 [INFO] [stderr] at src/libstd/panicking.rs:325 [INFO] [stderr] 18: 0x555bc35001f3 - std::panic::catch_unwind::h2afcfbf3125915b4 [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x555bc35001f3 - std::rt::lang_start_internal::h4f696727fe904f48 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x555bc32ea1c7 - std::rt::lang_start::h648bcadbf0f88830 [INFO] [stderr] at /rustc/85cc1486e1f000dce4bb8e1b3cfab2b654b102a8/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x555bc32e032a - main [INFO] [stderr] 22: 0x7f9575a3e0b3 - __libc_start_main [INFO] [stderr] 23: 0x555bc32da19e - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "80ab4608f45dfa8fc550239a13c7fb7499bd7fefac54738aab2b4a9cce18b8d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80ab4608f45dfa8fc550239a13c7fb7499bd7fefac54738aab2b4a9cce18b8d3", kill_on_drop: false }` [INFO] [stdout] 80ab4608f45dfa8fc550239a13c7fb7499bd7fefac54738aab2b4a9cce18b8d3