[INFO] updating cached repository https://github.com/alienzj/biotk [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] [stderr] From https://github.com/alienzj/biotk [INFO] [stderr] ab7d29c..060bf54 master -> master [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 060bf5498fed1c7b148d58bb6d8a2f1a64bb755c [INFO] checking alienzj/biotk against try#5fdfba63a96c5e8ae0ebf6b8b66853110277087d for pr-73166 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falienzj%2Fbiotk" "/workspace/builds/worker-14/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-14/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/alienzj/biotk on toolchain 5fdfba63a96c5e8ae0ebf6b8b66853110277087d [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5fdfba63a96c5e8ae0ebf6b8b66853110277087d" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/alienzj/biotk [INFO] finished tweaking git repo https://github.com/alienzj/biotk [INFO] tweaked toml for git repo https://github.com/alienzj/biotk written to /workspace/builds/worker-14/source/Cargo.toml [INFO] crate git repo https://github.com/alienzj/biotk already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5fdfba63a96c5e8ae0ebf6b8b66853110277087d" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5fdfba63a96c5e8ae0ebf6b8b66853110277087d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4c907c1cf783f2b0d8aa5c025d267f44cb74a14debc02a432f2542d9d04aa090 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4c907c1cf783f2b0d8aa5c025d267f44cb74a14debc02a432f2542d9d04aa090", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4c907c1cf783f2b0d8aa5c025d267f44cb74a14debc02a432f2542d9d04aa090", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4c907c1cf783f2b0d8aa5c025d267f44cb74a14debc02a432f2542d9d04aa090", kill_on_drop: false }` [INFO] [stdout] 4c907c1cf783f2b0d8aa5c025d267f44cb74a14debc02a432f2542d9d04aa090 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5fdfba63a96c5e8ae0ebf6b8b66853110277087d" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 62847d1c6e5e2778d5eff08949316e0da882bc2e2d80381dd541db65b1d3180e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "62847d1c6e5e2778d5eff08949316e0da882bc2e2d80381dd541db65b1d3180e", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.34 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking ppv-lite86 v0.2.8 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking ordermap v0.3.5 [INFO] [stderr] Checking bit-vec v0.6.2 [INFO] [stderr] Compiling bio v0.31.0 [INFO] [stderr] Checking fixedbitset v0.1.9 [INFO] [stderr] Checking fnv v1.0.7 [INFO] [stderr] Checking strum v0.18.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling lzma-sys v0.1.16 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Checking miniz_oxide v0.3.5 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking crc32fast v1.2.0 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Checking getrandom v0.1.14 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking petgraph v0.4.13 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking aho-corasick v0.7.13 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking flate2 v1.0.13 [INFO] [stderr] Checking xz2 v0.1.6 [INFO] [stderr] Checking bzip2 v0.3.3 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking regex v1.3.9 [INFO] [stderr] Checking num-traits v0.1.43 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking ordered-float v1.1.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking enum_primitive v0.1.1 [INFO] [stderr] Checking statrs v0.12.0 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling thiserror-impl v1.0.20 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling snafu-derive v0.6.8 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Checking thiserror v1.0.20 [INFO] [stderr] Checking niffler v2.2.0 [INFO] [stderr] Checking snafu v0.6.8 [INFO] [stderr] Checking serde v1.0.114 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking bstr v0.2.13 [INFO] [stderr] Checking multimap v0.6.0 [INFO] [stderr] Checking bio-types v0.7.0 [INFO] [stderr] Checking clap v2.33.0 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Checking biotk v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `reader` [INFO] [stdout] --> src/biotk.rs:44:9 [INFO] [stdout] | [INFO] [stdout] 44 | let reader = match buf[0] { [INFO] [stdout] | ^^^^^^ help: if this is intentional, prefix it with an underscore: `_reader` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/biotk.rs:39:5 [INFO] [stdout] | [INFO] [stdout] 39 | / match stream.read_exact(&mut buf) { [INFO] [stdout] 40 | | Ok(()) => Ok(()), [INFO] [stdout] 41 | | Err(_) => Err(niffler::error::Error::FileTooShort), [INFO] [stdout] 42 | | }; [INFO] [stdout] | |______^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `reader` [INFO] [stdout] --> src/biotk.rs:44:9 [INFO] [stdout] | [INFO] [stdout] 44 | let reader = match buf[0] { [INFO] [stdout] | ^^^^^^ help: if this is intentional, prefix it with an underscore: `_reader` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/biotk.rs:39:5 [INFO] [stdout] | [INFO] [stdout] 39 | / match stream.read_exact(&mut buf) { [INFO] [stdout] 40 | | Ok(()) => Ok(()), [INFO] [stdout] 41 | | Err(_) => Err(niffler::error::Error::FileTooShort), [INFO] [stdout] 42 | | }; [INFO] [stdout] | |______^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 46s [INFO] running `Command { std: "docker" "inspect" "62847d1c6e5e2778d5eff08949316e0da882bc2e2d80381dd541db65b1d3180e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "62847d1c6e5e2778d5eff08949316e0da882bc2e2d80381dd541db65b1d3180e", kill_on_drop: false }` [INFO] [stdout] 62847d1c6e5e2778d5eff08949316e0da882bc2e2d80381dd541db65b1d3180e