[INFO] crate libhdf5-sys 0.2.0 is already in cache [INFO] checking libhdf5-sys-0.2.0 against master#1557fb031b272b4c5bfcc7de5df7eddc7b36a584 for pr-73166 [INFO] extracting crate libhdf5-sys 0.2.0 into /workspace/builds/worker-11/source [INFO] validating manifest of crates.io crate libhdf5-sys 0.2.0 on toolchain 1557fb031b272b4c5bfcc7de5df7eddc7b36a584 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1557fb031b272b4c5bfcc7de5df7eddc7b36a584" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] finished tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] tweaked toml for crates.io crate libhdf5-sys 0.2.0 written to /workspace/builds/worker-11/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1557fb031b272b4c5bfcc7de5df7eddc7b36a584" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1557fb031b272b4c5bfcc7de5df7eddc7b36a584" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+1557fb031b272b4c5bfcc7de5df7eddc7b36a584" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ee29984c88b5152f5585877769c387c62bde0828ffb93138b83bdab2e1d720ce [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ee29984c88b5152f5585877769c387c62bde0828ffb93138b83bdab2e1d720ce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ee29984c88b5152f5585877769c387c62bde0828ffb93138b83bdab2e1d720ce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ee29984c88b5152f5585877769c387c62bde0828ffb93138b83bdab2e1d720ce", kill_on_drop: false }` [INFO] [stdout] ee29984c88b5152f5585877769c387c62bde0828ffb93138b83bdab2e1d720ce [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+1557fb031b272b4c5bfcc7de5df7eddc7b36a584" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7a9968f123f96699d27364d532a6b3f59e2b7943de269d1ce4e86bef5bf9780e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7a9968f123f96699d27364d532a6b3f59e2b7943de269d1ce4e86bef5bf9780e", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.73 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-L" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/self-contained" "/opt/rustwide/target/debug/build/libhdf5-sys-944b84b388bde94f/build_script_build-944b84b388bde94f.build_script_build.a3yax074-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-944b84b388bde94f/build_script_build-944b84b388bde94f.build_script_build.a3yax074-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-944b84b388bde94f/build_script_build-944b84b388bde94f.build_script_build.a3yax074-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-944b84b388bde94f/build_script_build-944b84b388bde94f.build_script_build.a3yax074-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-944b84b388bde94f/build_script_build-944b84b388bde94f.build_script_build.a3yax074-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-944b84b388bde94f/build_script_build-944b84b388bde94f" "/opt/rustwide/target/debug/build/libhdf5-sys-944b84b388bde94f/build_script_build-944b84b388bde94f.108nn441l2aqsfkc.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-fac4c801d07a2419.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-b6aff3703feff874.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-812457dcc335cb0e.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-d3b70323dc13665e.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-a72ca64738319f23.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-ae466ecb818a21c7.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-8965f725fa371d94.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-f5d385bbcf1c0598.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-14d182d411047066.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-45730ad7fe9247a8.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-95ea48ddc44a311b.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-077a7bdb239ba92c.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-68f423c59dc48a40.rlib" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-54580c7798bf2225.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/1557fb031b272b4c5bfcc7de5df7eddc7b36a584/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-31151f98ccdb185a.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `Command { std: "docker" "inspect" "7a9968f123f96699d27364d532a6b3f59e2b7943de269d1ce4e86bef5bf9780e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7a9968f123f96699d27364d532a6b3f59e2b7943de269d1ce4e86bef5bf9780e", kill_on_drop: false }` [INFO] [stdout] 7a9968f123f96699d27364d532a6b3f59e2b7943de269d1ce4e86bef5bf9780e