[INFO] crate hdf5-sys 0.6.1 is already in cache [INFO] checking hdf5-sys-0.6.1 against try#879b8cb7dc2ad9102994457e73cf78d124926ea5 for pr-73084 [INFO] extracting crate hdf5-sys 0.6.1 into /workspace/builds/worker-11/source [INFO] validating manifest of crates.io crate hdf5-sys 0.6.1 on toolchain 879b8cb7dc2ad9102994457e73cf78d124926ea5 [INFO] running `"/workspace/cargo-home/bin/cargo" "+879b8cb7dc2ad9102994457e73cf78d124926ea5" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-sys 0.6.1 [INFO] finished tweaking crates.io crate hdf5-sys 0.6.1 [INFO] tweaked toml for crates.io crate hdf5-sys 0.6.1 written to /workspace/builds/worker-11/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+879b8cb7dc2ad9102994457e73cf78d124926ea5" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+879b8cb7dc2ad9102994457e73cf78d124926ea5" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+879b8cb7dc2ad9102994457e73cf78d124926ea5" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] e29aaf918740db41c146063abbcfe810a922ba961cb221a16eb4456bf2e6f13b [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "e29aaf918740db41c146063abbcfe810a922ba961cb221a16eb4456bf2e6f13b"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling libloading v0.6.2 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Compiling aho-corasick v0.7.10 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling hdf5-sys v0.6.1 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-1bfcb579052644af/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55c043fed295 - backtrace::backtrace::libunwind::trace::haa412c68ebbfb7cb [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x55c043fed295 - backtrace::backtrace::trace_unsynchronized::ha108e3f35b74f2c0 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55c043fed295 - std::sys_common::backtrace::_print_fmt::h15e024020a5efe76 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x55c043fed295 - ::fmt::h0f0ee68588fafa16 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x55c044010e5c - core::fmt::write::h5e8e27a0c5da998b [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x55c043fea0f3 - std::io::Write::write_fmt::h40a97a3850da46f1 [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x55c043fef880 - std::sys_common::backtrace::_print::h1951082d2778220a [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x55c043fef880 - std::sys_common::backtrace::print::hb28523ad63a39f3d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x55c043fef880 - std::panicking::default_hook::{{closure}}::h335019dd84826d63 [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x55c043fef5cc - std::panicking::default_hook::h075f202ae1b09cd1 [INFO] [stderr] at src/libstd/panicking.rs:218 [INFO] [stderr] 10: 0x55c043fefeb7 - std::panicking::rust_panic_with_hook::hd172f806c3cae9b4 [INFO] [stderr] at src/libstd/panicking.rs:477 [INFO] [stderr] 11: 0x55c043f09169 - std::panicking::begin_panic::h974d4be068cf80db [INFO] [stderr] at /rustc/879b8cb7dc2ad9102994457e73cf78d124926ea5/src/libstd/panicking.rs:404 [INFO] [stderr] 12: 0x55c043dca52c - build_script_build::LibrarySearcher::try_locate_hdf5_library::hdfe9ad841ea824d9 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:523 [INFO] [stderr] 13: 0x55c043dcb8dc - build_script_build::main::h6a5e454c027a5537 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:601 [INFO] [stderr] 14: 0x55c043dd5aeb - std::rt::lang_start::{{closure}}::h42f493ed3375afaa [INFO] [stderr] at /rustc/879b8cb7dc2ad9102994457e73cf78d124926ea5/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x55c043ff0288 - std::rt::lang_start_internal::{{closure}}::h2864321e935738e7 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x55c043ff0288 - std::panicking::try::do_call::h333ff4828746b918 [INFO] [stderr] at src/libstd/panicking.rs:297 [INFO] [stderr] 17: 0x55c043ff0288 - std::panicking::try::h8e774ead4eea5983 [INFO] [stderr] at src/libstd/panicking.rs:274 [INFO] [stderr] 18: 0x55c043ff0288 - std::panic::catch_unwind::h16076fe2b012afda [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x55c043ff0288 - std::rt::lang_start_internal::hbf7659429e6237e7 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x55c043dd5ac7 - std::rt::lang_start::h7f4a2bde7e599406 [INFO] [stderr] at /rustc/879b8cb7dc2ad9102994457e73cf78d124926ea5/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x55c043dcc38a - main [INFO] [stderr] 22: 0x7fa3568610b3 - __libc_start_main [INFO] [stderr] 23: 0x55c043dc619e - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] [INFO] running `"docker" "inspect" "e29aaf918740db41c146063abbcfe810a922ba961cb221a16eb4456bf2e6f13b"` [INFO] running `"docker" "rm" "-f" "e29aaf918740db41c146063abbcfe810a922ba961cb221a16eb4456bf2e6f13b"` [INFO] [stdout] e29aaf918740db41c146063abbcfe810a922ba961cb221a16eb4456bf2e6f13b