[INFO] crate neuro 0.1.0 is already in cache [INFO] checking neuro-0.1.0 against master#450abe80f193ccefbfcd48214d70520f2d507f0e for pr-73084 [INFO] extracting crate neuro 0.1.0 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate neuro 0.1.0 on toolchain 450abe80f193ccefbfcd48214d70520f2d507f0e [INFO] running `"/workspace/cargo-home/bin/cargo" "+450abe80f193ccefbfcd48214d70520f2d507f0e" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate neuro 0.1.0 [INFO] finished tweaking crates.io crate neuro 0.1.0 [INFO] tweaked toml for crates.io crate neuro 0.1.0 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate crates.io crate neuro 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+450abe80f193ccefbfcd48214d70520f2d507f0e" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+450abe80f193ccefbfcd48214d70520f2d507f0e" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 7e897251c9f32f68816e8f962e26b8588f5b3c972e06818c3962627622ae6014 [INFO] running `"docker" "start" "-a" "7e897251c9f32f68816e8f962e26b8588f5b3c972e06818c3962627622ae6014"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling autocfg v0.1.7 [INFO] [stderr] Checking rand_core v0.4.2 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling cc v1.0.50 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Compiling syn v1.0.16 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking ppv-lite86 v0.2.6 [INFO] [stderr] Checking ascii v0.9.3 [INFO] [stderr] Checking number_prefix v0.3.0 [INFO] [stderr] Checking itoa v0.4.5 [INFO] [stderr] Checking bytemuck v1.2.0 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.3 [INFO] [stderr] Compiling num-iter v0.1.40 [INFO] [stderr] Checking lock_api v0.2.0 [INFO] [stderr] Checking inflate v0.4.5 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking gif v0.10.3 [INFO] [stderr] Compiling libc v0.2.67 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Checking rand_jitter v0.1.4 [INFO] [stderr] Compiling serde v1.0.104 [INFO] [stderr] Compiling proc-macro2 v1.0.9 [INFO] [stderr] Checking crc32fast v1.2.0 [INFO] [stderr] Checking num_cpus v1.12.0 [INFO] [stderr] Checking rand_os v0.1.3 [INFO] [stderr] Checking getrandom v0.1.14 [INFO] [stderr] Checking termios v0.3.1 [INFO] [stderr] Checking clicolors-control v1.0.1 [INFO] [stderr] Checking hdf5-types v0.6.0 [INFO] [stderr] Compiling memoffset v0.5.3 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Compiling aho-corasick v0.7.9 [INFO] [stderr] Checking deflate v0.7.20 [INFO] [stderr] Checking regex-automata v0.1.8 [INFO] [stderr] Checking tiff v0.4.0 [INFO] [stderr] Checking rand_hc v0.1.0 [INFO] [stderr] Checking rand_xorshift v0.1.1 [INFO] [stderr] Checking rand_isaac v0.1.1 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking c2-chacha v0.2.3 [INFO] [stderr] Checking bstr v0.2.11 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Checking smallvec v0.6.13 [INFO] [stderr] Checking png v0.15.3 [INFO] [stderr] Checking crossbeam-queue v0.2.1 [INFO] [stderr] Checking rand_chacha v0.2.1 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking regex v1.3.4 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Checking ndarray v0.12.1 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Checking rayon-core v1.7.0 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Checking rayon v1.3.0 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Checking console v0.9.2 [INFO] [stderr] Checking num v0.2.1 [INFO] [stderr] Checking indicatif v0.14.0 [INFO] [stderr] Compiling hdf5-sys v0.6.0 [INFO] [stderr] Checking jpeg-decoder v0.1.18 [INFO] [stderr] Compiling serde_derive v1.0.104 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-9b7236c470f38ad5/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5631abc13985 - backtrace::backtrace::libunwind::trace::haa412c68ebbfb7cb [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x5631abc13985 - backtrace::backtrace::trace_unsynchronized::ha108e3f35b74f2c0 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x5631abc13985 - std::sys_common::backtrace::_print_fmt::h15e024020a5efe76 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x5631abc13985 - ::fmt::h0f0ee68588fafa16 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x5631abc374ec - core::fmt::write::h5e8e27a0c5da998b [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x5631abc107e3 - std::io::Write::write_fmt::h40a97a3850da46f1 [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x5631abc15f70 - std::sys_common::backtrace::_print::h1951082d2778220a [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x5631abc15f70 - std::sys_common::backtrace::print::hb28523ad63a39f3d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x5631abc15f70 - std::panicking::default_hook::{{closure}}::h335019dd84826d63 [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x5631abc15cbc - std::panicking::default_hook::h075f202ae1b09cd1 [INFO] [stderr] at src/libstd/panicking.rs:218 [INFO] [stderr] 10: 0x5631abc165a7 - std::panicking::rust_panic_with_hook::hd172f806c3cae9b4 [INFO] [stderr] at src/libstd/panicking.rs:477 [INFO] [stderr] 11: 0x5631abb30eb9 - std::panicking::begin_panic::h5a56416ea7b88cea [INFO] [stderr] at /rustc/450abe80f193ccefbfcd48214d70520f2d507f0e/src/libstd/panicking.rs:404 [INFO] [stderr] 12: 0x5631ab9f256c - build_script_build::LibrarySearcher::try_locate_hdf5_library::h07d5c83e2b655c47 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527 [INFO] [stderr] 13: 0x5631ab9f391c - build_script_build::main::h4faa8ac29b6dc090 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:605 [INFO] [stderr] 14: 0x5631ab9fd5eb - std::rt::lang_start::{{closure}}::haa7081882d13a0a1 [INFO] [stderr] at /rustc/450abe80f193ccefbfcd48214d70520f2d507f0e/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x5631abc16978 - std::rt::lang_start_internal::{{closure}}::h2864321e935738e7 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x5631abc16978 - std::panicking::try::do_call::h333ff4828746b918 [INFO] [stderr] at src/libstd/panicking.rs:297 [INFO] [stderr] 17: 0x5631abc16978 - std::panicking::try::h8e774ead4eea5983 [INFO] [stderr] at src/libstd/panicking.rs:274 [INFO] [stderr] 18: 0x5631abc16978 - std::panic::catch_unwind::h16076fe2b012afda [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x5631abc16978 - std::rt::lang_start_internal::hbf7659429e6237e7 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x5631ab9fd5c7 - std::rt::lang_start::h75ca62060b6417e1 [INFO] [stderr] at /rustc/450abe80f193ccefbfcd48214d70520f2d507f0e/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x5631ab9f444a - main [INFO] [stderr] 22: 0x7f0e03e230b3 - __libc_start_main [INFO] [stderr] 23: 0x5631ab9ee1ae - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "7e897251c9f32f68816e8f962e26b8588f5b3c972e06818c3962627622ae6014"` [INFO] running `"docker" "rm" "-f" "7e897251c9f32f68816e8f962e26b8588f5b3c972e06818c3962627622ae6014"` [INFO] [stdout] 7e897251c9f32f68816e8f962e26b8588f5b3c972e06818c3962627622ae6014