[INFO] fetching crate hdf5-derive 0.6.1... [INFO] checking hdf5-derive-0.6.1 against try#4662032ab74cd44d423120d08d251dfead4914a0 for pr-72788 [INFO] extracting crate hdf5-derive 0.6.1 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate hdf5-derive 0.6.1 on toolchain 4662032ab74cd44d423120d08d251dfead4914a0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+4662032ab74cd44d423120d08d251dfead4914a0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-derive 0.6.1 [INFO] finished tweaking crates.io crate hdf5-derive 0.6.1 [INFO] tweaked toml for crates.io crate hdf5-derive 0.6.1 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+4662032ab74cd44d423120d08d251dfead4914a0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+4662032ab74cd44d423120d08d251dfead4914a0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded hdf5-sys v0.6.1 [INFO] [stderr] Downloaded hdf5-derive v0.6.1 [INFO] [stderr] Downloaded hdf5 v0.6.1 [INFO] [stderr] Downloaded hdf5-types v0.6.1 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+4662032ab74cd44d423120d08d251dfead4914a0" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] d5db99e3913202f35827a83eacc3e8eac223623e137663db10e5a4a7fad06852 [INFO] running `"docker" "start" "-a" "d5db99e3913202f35827a83eacc3e8eac223623e137663db10e5a4a7fad06852"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling syn v1.0.30 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling libloading v0.6.2 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling serde v1.0.111 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking smallvec v1.4.0 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Checking termcolor v1.1.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Compiling proc-macro2 v1.0.18 [INFO] [stderr] Checking lock_api v0.3.4 [INFO] [stderr] Checking parking_lot_core v0.7.2 [INFO] [stderr] Checking num-integer v0.1.42 [INFO] [stderr] Checking hdf5-types v0.6.1 [INFO] [stderr] Checking parking_lot v0.10.2 [INFO] [stderr] Compiling quote v1.0.6 [INFO] [stderr] Compiling aho-corasick v0.7.10 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Checking hdf5-derive v0.6.1 (/opt/rustwide/workdir) [INFO] [stderr] Compiling hdf5-sys v0.6.1 [INFO] [stderr] Compiling serde_derive v1.0.111 [INFO] [stderr] Compiling hdf5-derive v0.6.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-9edc06e461022e61/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x564668363d85 - backtrace::backtrace::libunwind::trace::h508d2c55eb856ef2 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x564668363d85 - backtrace::backtrace::trace_unsynchronized::h31c9d8a0097b92f8 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x564668363d85 - std::sys_common::backtrace::_print_fmt::h520f528c4c103a3f [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x564668363d85 - ::fmt::hf4dec5da8360bccb [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x5646683878cc - core::fmt::write::hdf236390fbd68d3d [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x564668360c03 - std::io::Write::write_fmt::hd33447f61d92a88a [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x564668366370 - std::sys_common::backtrace::_print::h856c809943c588ab [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x564668366370 - std::sys_common::backtrace::print::hc042b4237cc3648a [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x564668366370 - std::panicking::default_hook::{{closure}}::h35997132c163f935 [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x5646683660bc - std::panicking::default_hook::h8555bf398b0f1318 [INFO] [stderr] at src/libstd/panicking.rs:218 [INFO] [stderr] 10: 0x5646683669a7 - std::panicking::rust_panic_with_hook::h9b80e82887819c44 [INFO] [stderr] at src/libstd/panicking.rs:486 [INFO] [stderr] 11: 0x5646682814cb - std::panicking::begin_panic::hd0038e7a6a2cd867 [INFO] [stderr] at /rustc/4662032ab74cd44d423120d08d251dfead4914a0/src/libstd/panicking.rs:410 [INFO] [stderr] 12: 0x5646681453fb - build_script_build::LibrarySearcher::try_locate_hdf5_library::h33a329bf0ee36a33 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523 [INFO] [stderr] 13: 0x56466814676b - build_script_build::main::h7a0e1923b72efab0 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:601 [INFO] [stderr] 14: 0x56466815072b - std::rt::lang_start::{{closure}}::hc133656805d297a1 [INFO] [stderr] at /rustc/4662032ab74cd44d423120d08d251dfead4914a0/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x564668366d78 - std::rt::lang_start_internal::{{closure}}::h4c8bd631e3dc2cb9 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x564668366d78 - std::panicking::try::do_call::h88ce8513ed0d613c [INFO] [stderr] at src/libstd/panicking.rs:297 [INFO] [stderr] 17: 0x564668366d78 - std::panicking::try::he181ad9c483671e2 [INFO] [stderr] at src/libstd/panicking.rs:274 [INFO] [stderr] 18: 0x564668366d78 - std::panic::catch_unwind::heb113c382f4c732f [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x564668366d78 - std::rt::lang_start_internal::h807304d390ed60ab [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x564668150707 - std::rt::lang_start::h9b62eaa47573e07d [INFO] [stderr] at /rustc/4662032ab74cd44d423120d08d251dfead4914a0/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x56466814721a - main [INFO] [stderr] 22: 0x7f12265b50b3 - __libc_start_main [INFO] [stderr] 23: 0x56466814119e - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "d5db99e3913202f35827a83eacc3e8eac223623e137663db10e5a4a7fad06852"` [INFO] running `"docker" "rm" "-f" "d5db99e3913202f35827a83eacc3e8eac223623e137663db10e5a4a7fad06852"` [INFO] [stdout] d5db99e3913202f35827a83eacc3e8eac223623e137663db10e5a4a7fad06852