[INFO] crate neuro 0.1.0 is already in cache [INFO] checking neuro-0.1.0 against master#783139bd8fc3b94fac9a1bf81bba2c506e8221b6 for pr-72644 [INFO] extracting crate neuro 0.1.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate neuro 0.1.0 on toolchain 783139bd8fc3b94fac9a1bf81bba2c506e8221b6 [INFO] running `"/workspace/cargo-home/bin/cargo" "+783139bd8fc3b94fac9a1bf81bba2c506e8221b6" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate neuro 0.1.0 [INFO] finished tweaking crates.io crate neuro 0.1.0 [INFO] tweaked toml for crates.io crate neuro 0.1.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate crates.io crate neuro 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+783139bd8fc3b94fac9a1bf81bba2c506e8221b6" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+783139bd8fc3b94fac9a1bf81bba2c506e8221b6" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] 2daefdedf9424512047dda2c22463276a7fe803a8f38b37299441295b2736349 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "2daefdedf9424512047dda2c22463276a7fe803a8f38b37299441295b2736349"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling autocfg v0.1.7 [INFO] [stderr] Checking rand_core v0.4.2 [INFO] [stderr] Compiling serde v1.0.104 [INFO] [stderr] Compiling regex-syntax v0.6.14 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Checking either v1.5.3 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Checking ppv-lite86 v0.2.6 [INFO] [stderr] Checking lzw v0.10.0 [INFO] [stderr] Checking unicode-width v0.1.7 [INFO] [stderr] Checking color_quant v1.0.1 [INFO] [stderr] Checking ascii v0.9.3 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking scoped_threadpool v0.1.9 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling num-rational v0.2.3 [INFO] [stderr] Compiling num-iter v0.1.40 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Checking lock_api v0.2.0 [INFO] [stderr] Checking miniz_oxide v0.3.6 [INFO] [stderr] Checking inflate v0.4.5 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Checking rand_jitter v0.1.4 [INFO] [stderr] Checking walkdir v2.3.1 [INFO] [stderr] Checking gif v0.10.3 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling proc-macro2 v1.0.9 [INFO] [stderr] Compiling libc v0.2.67 [INFO] [stderr] Compiling memoffset v0.5.3 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Checking regex-automata v0.1.8 [INFO] [stderr] Checking deflate v0.7.20 [INFO] [stderr] Checking rand_hc v0.1.0 [INFO] [stderr] Checking rand_isaac v0.1.1 [INFO] [stderr] Checking rand_xorshift v0.1.1 [INFO] [stderr] Checking rand_os v0.1.3 [INFO] [stderr] Checking num_cpus v1.12.0 [INFO] [stderr] Checking clicolors-control v1.0.1 [INFO] [stderr] Checking termios v0.3.1 [INFO] [stderr] Checking hdf5-types v0.6.0 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Checking crossbeam-queue v0.2.1 [INFO] [stderr] Checking c2-chacha v0.2.3 [INFO] [stderr] Checking tiff v0.4.0 [INFO] [stderr] Compiling aho-corasick v0.7.9 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking png v0.15.3 [INFO] [stderr] Compiling syn v1.0.16 [INFO] [stderr] Checking rand_chacha v0.2.1 [INFO] [stderr] Checking crossbeam-epoch v0.8.2 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Checking ndarray v0.12.1 [INFO] [stderr] Checking rayon v1.3.0 [INFO] [stderr] Compiling regex v1.3.4 [INFO] [stderr] Checking console v0.9.2 [INFO] [stderr] Checking num v0.2.1 [INFO] [stderr] Checking indicatif v0.14.0 [INFO] [stderr] Compiling serde_derive v1.0.104 [INFO] [stderr] Checking jpeg-decoder v0.1.18 [INFO] [stderr] Compiling hdf5-sys v0.6.0 [INFO] [stderr] Checking bstr v0.2.11 [INFO] [stderr] Checking image v0.23.0 [INFO] [stderr] Compiling hdf5-derive v0.6.0 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-9b7236c470f38ad5/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5598685a6005 - backtrace::backtrace::libunwind::trace::h678b9599e62f63eb [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x5598685a6005 - backtrace::backtrace::trace_unsynchronized::hc151481f0e2d39cd [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x5598685a6005 - std::sys_common::backtrace::_print_fmt::he1b14c2dc4d370e2 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x5598685a6005 - ::fmt::h0e056b70ceff915d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x5598685c9aec - core::fmt::write::hdf236390fbd68d3d [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x5598685a2e83 - std::io::Write::write_fmt::h5b95d57b9d83617e [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x5598685a85f0 - std::sys_common::backtrace::_print::hde4f93cf630dd149 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x5598685a85f0 - std::sys_common::backtrace::print::hab894e5c65d4445d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x5598685a85f0 - std::panicking::default_hook::{{closure}}::h190ee58e2eec052f [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x5598685a833c - std::panicking::default_hook::he2b0e031648f6bed [INFO] [stderr] at src/libstd/panicking.rs:218 [INFO] [stderr] 10: 0x5598685a8c27 - std::panicking::rust_panic_with_hook::hd8d0481ab65c637b [INFO] [stderr] at src/libstd/panicking.rs:486 [INFO] [stderr] 11: 0x5598684c528b - std::panicking::begin_panic::h2862b0f686051a36 [INFO] [stderr] at /rustc/783139bd8fc3b94fac9a1bf81bba2c506e8221b6/src/libstd/panicking.rs:410 [INFO] [stderr] 12: 0x55986838941b - build_script_build::LibrarySearcher::try_locate_hdf5_library::h07d5c83e2b655c47 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527 [INFO] [stderr] 13: 0x55986838a78b - build_script_build::main::h4faa8ac29b6dc090 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:605 [INFO] [stderr] 14: 0x5598683945db - std::rt::lang_start::{{closure}}::h4536ef78bb464075 [INFO] [stderr] at /rustc/783139bd8fc3b94fac9a1bf81bba2c506e8221b6/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x5598685a8ff8 - std::rt::lang_start_internal::{{closure}}::h20875b53e93c05e5 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x5598685a8ff8 - std::panicking::try::do_call::hf41a9e99b462682c [INFO] [stderr] at src/libstd/panicking.rs:297 [INFO] [stderr] 17: 0x5598685a8ff8 - std::panicking::try::h676e31cbf6db58e0 [INFO] [stderr] at src/libstd/panicking.rs:274 [INFO] [stderr] 18: 0x5598685a8ff8 - std::panic::catch_unwind::h254ef3e93964825b [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x5598685a8ff8 - std::rt::lang_start_internal::h8a620deb31f7711f [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x5598683945b7 - std::rt::lang_start::ha3b1474ed55634bf [INFO] [stderr] at /rustc/783139bd8fc3b94fac9a1bf81bba2c506e8221b6/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x55986838b2ba - main [INFO] [stderr] 22: 0x7f2583f490b3 - __libc_start_main [INFO] [stderr] 23: 0x5598683851ae - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "2daefdedf9424512047dda2c22463276a7fe803a8f38b37299441295b2736349"` [INFO] running `"docker" "rm" "-f" "2daefdedf9424512047dda2c22463276a7fe803a8f38b37299441295b2736349"` [INFO] [stdout] 2daefdedf9424512047dda2c22463276a7fe803a8f38b37299441295b2736349