[INFO] crate hdf5-derive 0.6.1 is already in cache [INFO] checking hdf5-derive-0.6.1 against try#e2aab98dd8975a0990f9fbb79b3ea4b40559a184 for pr-72493 [INFO] extracting crate hdf5-derive 0.6.1 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate hdf5-derive 0.6.1 on toolchain e2aab98dd8975a0990f9fbb79b3ea4b40559a184 [INFO] running `"/workspace/cargo-home/bin/cargo" "+e2aab98dd8975a0990f9fbb79b3ea4b40559a184" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-derive 0.6.1 [INFO] finished tweaking crates.io crate hdf5-derive 0.6.1 [INFO] tweaked toml for crates.io crate hdf5-derive 0.6.1 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+e2aab98dd8975a0990f9fbb79b3ea4b40559a184" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/workspace/cargo-home/bin/cargo" "+e2aab98dd8975a0990f9fbb79b3ea4b40559a184" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+e2aab98dd8975a0990f9fbb79b3ea4b40559a184" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] 15e058601950db076f2b72c21a5b76bb4b06590670b70c3030948a369b7e34c5 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "15e058601950db076f2b72c21a5b76bb4b06590670b70c3030948a369b7e34c5"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Checking termcolor v1.1.0 [INFO] [stderr] Checking proc-macro2 v1.0.17 [INFO] [stderr] Compiling libloading v0.6.2 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling syn v1.0.27 [INFO] [stderr] Compiling hdf5-sys v0.6.1 [INFO] [stderr] Checking hdf5-types v0.6.1 [INFO] [stderr] Checking quote v1.0.6 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-4c400f44dab4bdf6/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x562404db8225 - backtrace::backtrace::libunwind::trace::h678b9599e62f63eb [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x562404db8225 - backtrace::backtrace::trace_unsynchronized::hb47d77776d18cf5b [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x562404db8225 - std::sys_common::backtrace::_print_fmt::he1b14c2dc4d370e2 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x562404db8225 - ::fmt::h0e056b70ceff915d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x562404ddbd6c - core::fmt::write::hdf236390fbd68d3d [INFO] [stderr] at src/libcore/fmt/mod.rs:1069 [INFO] [stderr] 5: 0x562404db50a3 - std::io::Write::write_fmt::h5b95d57b9d83617e [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x562404dba810 - std::sys_common::backtrace::_print::hde4f93cf630dd149 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x562404dba810 - std::sys_common::backtrace::print::hab894e5c65d4445d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x562404dba810 - std::panicking::default_hook::{{closure}}::h069a26eaaf53ac74 [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x562404dba55c - std::panicking::default_hook::he2b0e031648f6bed [INFO] [stderr] at src/libstd/panicking.rs:218 [INFO] [stderr] 10: 0x562404dbae47 - std::panicking::rust_panic_with_hook::hd8d0481ab65c637b [INFO] [stderr] at src/libstd/panicking.rs:486 [INFO] [stderr] 11: 0x562404cd6e9b - std::panicking::begin_panic::h54c33d83da006729 [INFO] [stderr] at /rustc/e2aab98dd8975a0990f9fbb79b3ea4b40559a184/src/libstd/panicking.rs:410 [INFO] [stderr] 12: 0x562404b9b3fb - build_script_build::LibrarySearcher::try_locate_hdf5_library::h7317f1d7f71d5cd4 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523 [INFO] [stderr] 13: 0x562404b9c76b - build_script_build::main::hecdbc2b79601db9e [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:601 [INFO] [stderr] 14: 0x562404ba666b - std::rt::lang_start::{{closure}}::h4c8aa038c567e271 [INFO] [stderr] at /rustc/e2aab98dd8975a0990f9fbb79b3ea4b40559a184/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x562404dbb218 - std::rt::lang_start_internal::{{closure}}::h4838b364df25be59 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x562404dbb218 - std::panicking::try::do_call::h0f9bf126f2a30e0a [INFO] [stderr] at src/libstd/panicking.rs:297 [INFO] [stderr] 17: 0x562404dbb218 - std::panicking::try::hf7f4f4a8291fe18c [INFO] [stderr] at src/libstd/panicking.rs:274 [INFO] [stderr] 18: 0x562404dbb218 - std::panic::catch_unwind::hf0742a1b2a42157f [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x562404dbb218 - std::rt::lang_start_internal::h8a620deb31f7711f [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x562404ba6647 - std::rt::lang_start::h2c588464ba8f03a1 [INFO] [stderr] at /rustc/e2aab98dd8975a0990f9fbb79b3ea4b40559a184/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x562404b9d21a - main [INFO] [stderr] 22: 0x7f90e450d0b3 - __libc_start_main [INFO] [stderr] 23: 0x562404b9719e - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "15e058601950db076f2b72c21a5b76bb4b06590670b70c3030948a369b7e34c5"` [INFO] running `"docker" "rm" "-f" "15e058601950db076f2b72c21a5b76bb4b06590670b70c3030948a369b7e34c5"` [INFO] [stdout] 15e058601950db076f2b72c21a5b76bb4b06590670b70c3030948a369b7e34c5