[INFO] crate libhdf5-sys 0.2.0 is already in cache [INFO] checking libhdf5-sys-0.2.0 against master#45d050cde277b22a755847338f2acc2c7b834141 for pr-71393 [INFO] extracting crate libhdf5-sys 0.2.0 into /workspace/builds/worker-8/source [INFO] validating manifest of crates.io crate libhdf5-sys 0.2.0 on toolchain 45d050cde277b22a755847338f2acc2c7b834141 [INFO] running `"/workspace/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] finished tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] tweaked toml for crates.io crate libhdf5-sys 0.2.0 written to /workspace/builds/worker-8/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 8288997a68817f8196b04003a72dc08db802969ed6eedd68685c60ee748a3e61 [INFO] running `"docker" "start" "-a" "8288997a68817f8196b04003a72dc08db802969ed6eedd68685c60ee748a3e61"` [INFO] [stderr] Compiling libc v0.2.69 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-f834565f5d157ce2/build_script_build-f834565f5d157ce2.build_script_build.ao2j5c4x-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-f834565f5d157ce2/build_script_build-f834565f5d157ce2.build_script_build.ao2j5c4x-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-f834565f5d157ce2/build_script_build-f834565f5d157ce2.build_script_build.ao2j5c4x-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-f834565f5d157ce2/build_script_build-f834565f5d157ce2.build_script_build.ao2j5c4x-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-f834565f5d157ce2/build_script_build-f834565f5d157ce2.build_script_build.ao2j5c4x-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-f834565f5d157ce2/build_script_build-f834565f5d157ce2" "/opt/rustwide/target/debug/build/libhdf5-sys-f834565f5d157ce2/build_script_build-f834565f5d157ce2.h0212m76k8u9p8t.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-8a00890a88982121.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-5614b70b6fd0e708.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-e24d9c3e0af220ca.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-bd2a73509a31b06b.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-fd7d2b04e0481c5a.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-23734be6bbdcf063.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-966629ce19a3f0d1.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-af85f70ebd2e41d6.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-41efeefffe19a22e.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-aead07132eb74cc9.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-6bd08a339975e8eb.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-e78a3c075dd84b00.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-6dedcd93de2f749e.rlib" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-d37880d94a65d8b0.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/45d050cde277b22a755847338f2acc2c7b834141/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-754779e5803073ef.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "8288997a68817f8196b04003a72dc08db802969ed6eedd68685c60ee748a3e61"` [INFO] running `"docker" "rm" "-f" "8288997a68817f8196b04003a72dc08db802969ed6eedd68685c60ee748a3e61"` [INFO] [stdout] 8288997a68817f8196b04003a72dc08db802969ed6eedd68685c60ee748a3e61