[INFO] updating cached repository https://github.com/sndrtj/fastq-count [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 8aa8cb4b010a5bc0ec99732c0e3ee2a0cac7fd7b [INFO] checking sndrtj/fastq-count against master#45d050cde277b22a755847338f2acc2c7b834141 for pr-71393 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsndrtj%2Ffastq-count" "/workspace/builds/worker-2/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/sndrtj/fastq-count on toolchain 45d050cde277b22a755847338f2acc2c7b834141 [INFO] running `"/workspace/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/sndrtj/fastq-count [INFO] finished tweaking git repo https://github.com/sndrtj/fastq-count [INFO] tweaked toml for git repo https://github.com/sndrtj/fastq-count written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate git repo https://github.com/sndrtj/fastq-count already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] fb6824106e299bdccf128110b5d0103c4265d0a8d16416662a9e3bcf72231df5 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "fb6824106e299bdccf128110b5d0103c4265d0a8d16416662a9e3bcf72231df5"` [INFO] [stderr] Compiling libc v0.2.53 [INFO] [stderr] Compiling proc-macro2 v0.4.29 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling serde v1.0.90 [INFO] [stderr] Compiling ryu v0.2.7 [INFO] [stderr] Compiling byteorder v1.3.1 [INFO] [stderr] Compiling num-complex v0.2.1 [INFO] [stderr] Checking lazy_static v1.3.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling cc v1.0.35 [INFO] [stderr] Checking ucd-util v0.1.3 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Checking itoa v0.4.3 [INFO] [stderr] Checking either v1.5.2 [INFO] [stderr] Checking utf8-ranges v1.0.2 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Checking quick-error v1.2.2 [INFO] [stderr] Checking fnv v1.0.6 [INFO] [stderr] Checking bytecount v0.3.2 [INFO] [stderr] Checking regex-syntax v0.6.6 [INFO] [stderr] Checking thread_local v0.3.6 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking bit-set v0.5.1 [INFO] [stderr] Checking num-integer v0.1.39 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Checking memchr v2.2.0 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking ndarray v0.12.1 [INFO] [stderr] Compiling miniz-sys v0.1.11 [INFO] [stderr] Compiling syn v0.15.33 [INFO] [stderr] Checking aho-corasick v0.7.3 [INFO] [stderr] Checking csv-core v0.1.5 [INFO] [stderr] Checking rand v0.3.23 [INFO] [stderr] Checking statrs v0.9.0 [INFO] [stderr] Checking flate2 v0.2.20 [INFO] [stderr] Checking regex v1.1.6 [INFO] [stderr] Compiling serde_derive v1.0.90 [INFO] [stderr] Checking csv v1.0.7 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking serde_json v1.0.39 [INFO] [stderr] Checking fastq-count v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/main.rs:14:43 [INFO] [stderr] | [INFO] [stderr] 14 | fn get_fastq_reader(path: &String) -> Box<::std::io::Read> { [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: use `dyn`: `dyn (::std::io::Read)` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/main.rs:14:43 [INFO] [stderr] | [INFO] [stderr] 14 | fn get_fastq_reader(path: &String) -> Box<::std::io::Read> { [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: use `dyn`: `dyn (::std::io::Read)` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 00s [INFO] running `"docker" "inspect" "fb6824106e299bdccf128110b5d0103c4265d0a8d16416662a9e3bcf72231df5"` [INFO] running `"docker" "rm" "-f" "fb6824106e299bdccf128110b5d0103c4265d0a8d16416662a9e3bcf72231df5"` [INFO] [stdout] fb6824106e299bdccf128110b5d0103c4265d0a8d16416662a9e3bcf72231df5