[INFO] updating cached repository https://github.com/10XGenomics/rust-pseudoaligner
[INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"`
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] 7df39e186d4352c5c5a8af44262291a4c1c3cea9
[INFO] checking 10XGenomics/rust-pseudoaligner against master#45d050cde277b22a755847338f2acc2c7b834141 for pr-71393
[INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner" "/workspace/builds/worker-2/source"`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/rust-pseudoaligner on toolchain 45d050cde277b22a755847338f2acc2c7b834141
[INFO] running `"/workspace/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] finished tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] tweaked toml for git repo https://github.com/10XGenomics/rust-pseudoaligner written to /workspace/builds/worker-2/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/rust-pseudoaligner already has a lockfile, it will not be regenerated
[INFO] running `"/workspace/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+45d050cde277b22a755847338f2acc2c7b834141" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 1c6183c1c1ed2aa5e68f9114060bb11e2f33f76685e1b42c64a20316ae02c3bf
[INFO] running `"docker" "start" "-a" "1c6183c1c1ed2aa5e68f9114060bb11e2f33f76685e1b42c64a20316ae02c3bf"`
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[INFO] [stderr]     Checking boomphf v0.5.2
[INFO] [stderr]     Checking debruijn v0.3.0 (https://github.com/10XGenomics/rust-debruijn#dc41dd29)
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[INFO] [stderr] warning: unnecessary parentheses around type
[INFO] [stderr]    --> src/mappability.rs:120:67
[INFO] [stderr]     |
[INFO] [stderr] 120 | pub fn analyze_graph<K: Kmer>(index: &Pseudoaligner<K>) -> Result<(Vec<MappabilityRecord>), Error> {
[INFO] [stderr]     |                                                                   ^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_parens)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: use of deprecated item 'debruijn::msp::simple_scan': Please use the `Scanner` type instead 
[INFO] [stderr]    --> src/build_index.rs:252:20
[INFO] [stderr]     |
[INFO] [stderr] 252 |         let msps = debruijn::msp::simple_scan::<_, PmerType>(K::k(), contig, &PERM, !STRANDED);
[INFO] [stderr]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unnecessary parentheses around type
[INFO] [stderr]    --> src/mappability.rs:120:67
[INFO] [stderr]     |
[INFO] [stderr] 120 | pub fn analyze_graph<K: Kmer>(index: &Pseudoaligner<K>) -> Result<(Vec<MappabilityRecord>), Error> {
[INFO] [stderr]     |                                                                   ^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_parens)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: use of deprecated item 'debruijn::msp::simple_scan': Please use the `Scanner` type instead 
[INFO] [stderr]    --> src/build_index.rs:252:20
[INFO] [stderr]     |
[INFO] [stderr] 252 |         let msps = debruijn::msp::simple_scan::<_, PmerType>(K::k(), contig, &PERM, !STRANDED);
[INFO] [stderr]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function is never used: `test_gencode_full_build`
[INFO] [stderr]    --> src/build_index.rs:402:8
[INFO] [stderr]     |
[INFO] [stderr] 402 |     fn test_gencode_full_build() -> Result<(), Error> {
[INFO] [stderr]     |        ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: 3 warnings emitted
[INFO] [stderr] 
[INFO] [stderr] warning: 2 warnings emitted
[INFO] [stderr] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3m 54s
[INFO] running `"docker" "inspect" "1c6183c1c1ed2aa5e68f9114060bb11e2f33f76685e1b42c64a20316ae02c3bf"`
[INFO] running `"docker" "rm" "-f" "1c6183c1c1ed2aa5e68f9114060bb11e2f33f76685e1b42c64a20316ae02c3bf"`
[INFO] [stdout] 1c6183c1c1ed2aa5e68f9114060bb11e2f33f76685e1b42c64a20316ae02c3bf