[INFO] crate global-supertrees 0.1.0 is already in cache [INFO] testing global-supertrees-0.1.0 against master#28742a1146f10a4f09369baad027a464acb7a766 for pr-71274 [INFO] extracting crate global-supertrees 0.1.0 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate global-supertrees 0.1.0 on toolchain 28742a1146f10a4f09369baad027a464acb7a766 [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate global-supertrees 0.1.0 [INFO] finished tweaking crates.io crate global-supertrees 0.1.0 [INFO] tweaked toml for crates.io crate global-supertrees 0.1.0 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "build" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6e5c2c2b49ac29af429374b21ca5074972aed36c4f4aa822d0ea906a953802ba [INFO] running `"docker" "start" "-a" "6e5c2c2b49ac29af429374b21ca5074972aed36c4f4aa822d0ea906a953802ba"` [INFO] [stderr] Compiling libc v0.2.69 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling serde v1.0.106 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling aho-corasick v0.7.10 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling crossbeam-queue v0.2.1 [INFO] [stderr] Compiling syn v1.0.17 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling rayon v1.3.0 [INFO] [stderr] Compiling regex v1.3.7 [INFO] [stderr] Compiling serde_derive v1.0.106 [INFO] [stderr] Compiling bincode v1.2.1 [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 07s [INFO] running `"docker" "inspect" "6e5c2c2b49ac29af429374b21ca5074972aed36c4f4aa822d0ea906a953802ba"` [INFO] running `"docker" "rm" "-f" "6e5c2c2b49ac29af429374b21ca5074972aed36c4f4aa822d0ea906a953802ba"` [INFO] [stdout] 6e5c2c2b49ac29af429374b21ca5074972aed36c4f4aa822d0ea906a953802ba [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen" "--no-run"` [INFO] [stdout] a9de9f965c76f58ebd6d4ceb5a3701af7e30ccac7676e740c6672f7d1361b155 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "a9de9f965c76f58ebd6d4ceb5a3701af7e30ccac7676e740c6672f7d1361b155"` [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 6.48s [INFO] running `"docker" "inspect" "a9de9f965c76f58ebd6d4ceb5a3701af7e30ccac7676e740c6672f7d1361b155"` [INFO] running `"docker" "rm" "-f" "a9de9f965c76f58ebd6d4ceb5a3701af7e30ccac7676e740c6672f7d1361b155"` [INFO] [stdout] a9de9f965c76f58ebd6d4ceb5a3701af7e30ccac7676e740c6672f7d1361b155 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 8da542a92cdc5e390fcd09e1320dd6688d5751e94afc8e2f27d88179dc462993 [INFO] running `"docker" "start" "-a" "8da542a92cdc5e390fcd09e1320dd6688d5751e94afc8e2f27d88179dc462993"` [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.19s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/global_supertrees-c1e62775df81d85e [INFO] [stdout] [INFO] [stdout] running 16 tests [INFO] [stdout] test tests::tests::test_find_first_zero ... ok [INFO] [stdout] test tests::tests::test_find_first_common_ancestor ... ok [INFO] [stdout] test tests::tests::test_load_tree_file ... ok [INFO] [stdout] test tests::tests::test_get_levels_from_root ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_3 ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_1 ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_2 ... ok [INFO] [stdout] test tests::tests::test_to_dot ... ok [INFO] [stdout] test tests::tests::test_batch_id_tax_mapping ... FAILED [INFO] [stdout] test tests::tests::test_merge_organisms ... FAILED [INFO] [stdout] test tests::tests::test_get_partial_tree ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium_nested ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_simple ... ok [INFO] [stdout] test tests::tests::test_neighbour_joining ... ok [INFO] [stdout] test tests::tests::test_tree_merging ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_batch_id_tax_mapping stdout ---- [INFO] [stdout] thread 'tests::tests::test_batch_id_tax_mapping' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:13 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x563ca35386a4 - backtrace::backtrace::libunwind::trace::hbb4ce8c04526962e [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x563ca35386a4 - backtrace::backtrace::trace_unsynchronized::h79251c088e7be038 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x563ca35386a4 - std::sys_common::backtrace::_print_fmt::h6b0ea30a9223acae [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x563ca35386a4 - ::fmt::h4d51ef07ce58e54b [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x563ca35635dc - core::fmt::write::he16b9c1345d8565e [INFO] [stdout] at src/libcore/fmt/mod.rs:1069 [INFO] [stdout] 5: 0x563ca32b2345 - std::io::Write::write_fmt::hc31efe493f037457 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/io/mod.rs:1504 [INFO] [stdout] 6: 0x563ca3532901 - std::io::impls::>::write_fmt::hfcb1ff6c5b834381 [INFO] [stdout] at src/libstd/io/impls.rs:156 [INFO] [stdout] 7: 0x563ca353af85 - std::sys_common::backtrace::_print::h9288fa7d9f6629cb [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x563ca353af85 - std::sys_common::backtrace::print::h82e606e62781d8af [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x563ca353af85 - std::panicking::default_hook::{{closure}}::h1fe350ecbf7604e4 [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x563ca353ac6b - std::panicking::default_hook::h1b8b42953fdc841d [INFO] [stdout] at src/libstd/panicking.rs:215 [INFO] [stdout] 11: 0x563ca353b5e2 - std::panicking::rust_panic_with_hook::he73826f4bb75a21e [INFO] [stdout] at src/libstd/panicking.rs:511 [INFO] [stdout] 12: 0x563ca353b1cb - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:419 [INFO] [stdout] 13: 0x563ca35613a1 - core::panicking::panic_fmt::hc8f9a0b2af5fb585 [INFO] [stdout] at src/libcore/panicking.rs:111 [INFO] [stdout] 14: 0x563ca35611c3 - core::option::expect_none_failed::ha34d57526cca3063 [INFO] [stdout] at src/libcore/option.rs:1268 [INFO] [stdout] 15: 0x563ca31ebf09 - core::result::Result::expect::h811a776e73d8486a [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/result.rs:963 [INFO] [stdout] 16: 0x563ca328a012 - global_supertrees::uniprot::load_mapping_file::h921378bcf063965f [INFO] [stdout] at src/uniprot.rs:34 [INFO] [stdout] 17: 0x563ca3206f40 - global_supertrees::tests::tests::test_batch_id_tax_mapping::h19372c04fb3e30aa [INFO] [stdout] at src/tests.rs:230 [INFO] [stdout] 18: 0x563ca3206dfa - global_supertrees::tests::tests::test_batch_id_tax_mapping::{{closure}}::hfda1b257a5c116b1 [INFO] [stdout] at src/tests.rs:227 [INFO] [stdout] 19: 0x563ca329c08e - core::ops::function::FnOnce::call_once::h918f95a552b5a41f [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 20: 0x563ca32be23f - as core::ops::function::FnOnce>::call_once::he1ba1da20629a2d8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 21: 0x563ca32d983e - as core::ops::function::FnOnce<()>>::call_once::hf94927858761de4a [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 22: 0x563ca32d983e - std::panicking::try::do_call::h1585003392664d93 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 23: 0x563ca32d983e - std::panicking::try::h43d950f958a74468 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 24: 0x563ca32d983e - std::panic::catch_unwind::hb5284de2977ddeea [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 25: 0x563ca32d983e - test::run_test_in_process::had39bb305b26a3ae [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 26: 0x563ca32d983e - test::run_test::run_test_inner::{{closure}}::h12b1756b854ada1a [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 27: 0x563ca32b17f6 - std::sys_common::backtrace::__rust_begin_short_backtrace::hec04b80bece92bf9 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 28: 0x563ca32b6b15 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::heca431434c1ac418 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:475 [INFO] [stdout] 29: 0x563ca32b6b15 - as core::ops::function::FnOnce<()>>::call_once::he2457d582c032747 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 30: 0x563ca32b6b15 - std::panicking::try::do_call::hbcd49dc3823e8b28 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 31: 0x563ca32b6b15 - std::panicking::try::h1ba95c07dd8d422b [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 32: 0x563ca32b6b15 - std::panic::catch_unwind::h95854794ba9eee4c [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 33: 0x563ca32b6b15 - std::thread::Builder::spawn_unchecked::{{closure}}::h4e297b8574092d6e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:474 [INFO] [stdout] 34: 0x563ca32b6b15 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h1b855aad7f5ac67e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 35: 0x563ca352ea8f - as core::ops::function::FnOnce>::call_once::h48069b269ca48108 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 36: 0x563ca3541ef3 - as core::ops::function::FnOnce>::call_once::heff660b32cd3afd8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 37: 0x563ca3541ef3 - std::sys::unix::thread::Thread::new::thread_start::ha538939ed1e2e958 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 38: 0x7ffbde1826db - start_thread [INFO] [stdout] 39: 0x7ffbddc9388f - __clone [INFO] [stdout] 40: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_merge_organisms stdout ---- [INFO] [stdout] thread 'tests::tests::test_merge_organisms' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:13 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x563ca35386a4 - backtrace::backtrace::libunwind::trace::hbb4ce8c04526962e [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x563ca35386a4 - backtrace::backtrace::trace_unsynchronized::h79251c088e7be038 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x563ca35386a4 - std::sys_common::backtrace::_print_fmt::h6b0ea30a9223acae [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x563ca35386a4 - ::fmt::h4d51ef07ce58e54b [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x563ca35635dc - core::fmt::write::he16b9c1345d8565e [INFO] [stdout] at src/libcore/fmt/mod.rs:1069 [INFO] [stdout] 5: 0x563ca32b2345 - std::io::Write::write_fmt::hc31efe493f037457 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/io/mod.rs:1504 [INFO] [stdout] 6: 0x563ca3532901 - std::io::impls::>::write_fmt::hfcb1ff6c5b834381 [INFO] [stdout] at src/libstd/io/impls.rs:156 [INFO] [stdout] 7: 0x563ca353af85 - std::sys_common::backtrace::_print::h9288fa7d9f6629cb [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x563ca353af85 - std::sys_common::backtrace::print::h82e606e62781d8af [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x563ca353af85 - std::panicking::default_hook::{{closure}}::h1fe350ecbf7604e4 [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x563ca353ac6b - std::panicking::default_hook::h1b8b42953fdc841d [INFO] [stdout] at src/libstd/panicking.rs:215 [INFO] [stdout] 11: 0x563ca353b5e2 - std::panicking::rust_panic_with_hook::he73826f4bb75a21e [INFO] [stdout] at src/libstd/panicking.rs:511 [INFO] [stdout] 12: 0x563ca353b1cb - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:419 [INFO] [stdout] 13: 0x563ca35613a1 - core::panicking::panic_fmt::hc8f9a0b2af5fb585 [INFO] [stdout] at src/libcore/panicking.rs:111 [INFO] [stdout] 14: 0x563ca35611c3 - core::option::expect_none_failed::ha34d57526cca3063 [INFO] [stdout] at src/libcore/option.rs:1268 [INFO] [stdout] 15: 0x563ca31ebf09 - core::result::Result::expect::h811a776e73d8486a [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/result.rs:963 [INFO] [stdout] 16: 0x563ca328a012 - global_supertrees::uniprot::load_mapping_file::h921378bcf063965f [INFO] [stdout] at src/uniprot.rs:34 [INFO] [stdout] 17: 0x563ca32071c8 - global_supertrees::tests::tests::test_merge_organisms::he7076bd2d556982c [INFO] [stdout] at src/tests.rs:237 [INFO] [stdout] 18: 0x563ca320716a - global_supertrees::tests::tests::test_merge_organisms::{{closure}}::he83f7329ca73e04b [INFO] [stdout] at src/tests.rs:235 [INFO] [stdout] 19: 0x563ca329c14e - core::ops::function::FnOnce::call_once::h9d735ccf963b0fd4 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 20: 0x563ca32be23f - as core::ops::function::FnOnce>::call_once::he1ba1da20629a2d8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 21: 0x563ca32d983e - as core::ops::function::FnOnce<()>>::call_once::hf94927858761de4a [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 22: 0x563ca32d983e - std::panicking::try::do_call::h1585003392664d93 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 23: 0x563ca32d983e - std::panicking::try::h43d950f958a74468 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 24: 0x563ca32d983e - std::panic::catch_unwind::hb5284de2977ddeea [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 25: 0x563ca32d983e - test::run_test_in_process::had39bb305b26a3ae [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 26: 0x563ca32d983e - test::run_test::run_test_inner::{{closure}}::h12b1756b854ada1a [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 27: 0x563ca32b17f6 - std::sys_common::backtrace::__rust_begin_short_backtrace::hec04b80bece92bf9 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 28: 0x563ca32b6b15 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::heca431434c1ac418 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:475 [INFO] [stdout] 29: 0x563ca32b6b15 - as core::ops::function::FnOnce<()>>::call_once::he2457d582c032747 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 30: 0x563ca32b6b15 - std::panicking::try::do_call::hbcd49dc3823e8b28 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 31: 0x563ca32b6b15 - std::panicking::try::h1ba95c07dd8d422b [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 32: 0x563ca32b6b15 - std::panic::catch_unwind::h95854794ba9eee4c [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 33: 0x563ca32b6b15 - std::thread::Builder::spawn_unchecked::{{closure}}::h4e297b8574092d6e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:474 [INFO] [stdout] 34: 0x563ca32b6b15 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h1b855aad7f5ac67e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 35: 0x563ca352ea8f - as core::ops::function::FnOnce>::call_once::h48069b269ca48108 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 36: 0x563ca3541ef3 - as core::ops::function::FnOnce>::call_once::heff660b32cd3afd8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 37: 0x563ca3541ef3 - std::sys::unix::thread::Thread::new::thread_start::ha538939ed1e2e958 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 38: 0x7ffbde1826db - start_thread [INFO] [stdout] 39: 0x7ffbddc9388f - __clone [INFO] [stdout] 40: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::tests::test_batch_id_tax_mapping [INFO] [stdout] tests::tests::test_merge_organisms [INFO] [stdout] [INFO] [stdout] test result: FAILED. 14 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin global-supertrees' [INFO] running `"docker" "inspect" "8da542a92cdc5e390fcd09e1320dd6688d5751e94afc8e2f27d88179dc462993"` [INFO] running `"docker" "rm" "-f" "8da542a92cdc5e390fcd09e1320dd6688d5751e94afc8e2f27d88179dc462993"` [INFO] [stdout] 8da542a92cdc5e390fcd09e1320dd6688d5751e94afc8e2f27d88179dc462993