[INFO] updating cached repository https://github.com/hurwitzlab/kmer_frequencies [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] a3e829692619ac06cd67090afc64be3198e494c0 [INFO] testing hurwitzlab/kmer_frequencies against master#28742a1146f10a4f09369baad027a464acb7a766 for pr-71274 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhurwitzlab%2Fkmer_frequencies" "/workspace/builds/worker-0/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/hurwitzlab/kmer_frequencies on toolchain 28742a1146f10a4f09369baad027a464acb7a766 [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/hurwitzlab/kmer_frequencies [INFO] finished tweaking git repo https://github.com/hurwitzlab/kmer_frequencies [INFO] tweaked toml for git repo https://github.com/hurwitzlab/kmer_frequencies written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate git repo https://github.com/hurwitzlab/kmer_frequencies already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "build" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 10db0cc0312651b337ce90bbf2c16ccee3137d54920e093558ff7fd39a212d38 [INFO] running `"docker" "start" "-a" "10db0cc0312651b337ce90bbf2c16ccee3137d54920e093558ff7fd39a212d38"` [INFO] [stderr] Compiling proc-macro2 v0.4.13 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling serde v1.0.72 [INFO] [stderr] Compiling version_check v0.1.4 [INFO] [stderr] Compiling matrixmultiply v0.1.14 [INFO] [stderr] Compiling either v1.5.0 [INFO] [stderr] Compiling bv v0.7.4 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling ndarray v0.9.1 [INFO] [stderr] Compiling void v1.0.2 [INFO] [stderr] Compiling num-integer v0.1.39 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Compiling byteorder v1.2.4 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling bit-vec v0.4.4 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling strsim v0.7.0 [INFO] [stderr] Compiling approx v0.1.1 [INFO] [stderr] Compiling bitflags v1.0.4 [INFO] [stderr] Compiling lazy_static v0.2.11 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling memchr v2.0.1 [INFO] [stderr] Compiling rand v0.4.3 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling itertools v0.6.5 [INFO] [stderr] Compiling itertools v0.7.8 [INFO] [stderr] Compiling regex-syntax v0.5.6 [INFO] [stderr] Compiling unreachable v0.1.1 [INFO] [stderr] Compiling textwrap v0.10.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling bit-set v0.4.0 [INFO] [stderr] Compiling lazy_static v1.1.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling csv-core v0.1.4 [INFO] [stderr] Compiling aho-corasick v0.6.6 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling num-complex v0.1.43 [INFO] [stderr] Compiling rand v0.3.22 [INFO] [stderr] Compiling ordered-float v0.5.0 [INFO] [stderr] Compiling itertools-num v0.1.1 [INFO] [stderr] Compiling quote v0.6.6 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling syn v0.14.9 [INFO] [stderr] Compiling serde_derive v1.0.72 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bio-types v0.2.0 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling csv v1.0.0 [INFO] [stderr] Compiling clap v2.32.0 [INFO] [stderr] Compiling bio v0.22.0 [INFO] [stderr] Compiling kmer_frequencies v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:15:34 [INFO] [stderr] | [INFO] [stderr] 15 | type MyResult = Result>; [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 56s [INFO] running `"docker" "inspect" "10db0cc0312651b337ce90bbf2c16ccee3137d54920e093558ff7fd39a212d38"` [INFO] running `"docker" "rm" "-f" "10db0cc0312651b337ce90bbf2c16ccee3137d54920e093558ff7fd39a212d38"` [INFO] [stdout] 10db0cc0312651b337ce90bbf2c16ccee3137d54920e093558ff7fd39a212d38 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen" "--no-run"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 675cea58813d48439a1f61a8df6e7e9f5e4a1df4d4b35d524e235a85bf1e18e0 [INFO] running `"docker" "start" "-a" "675cea58813d48439a1f61a8df6e7e9f5e4a1df4d4b35d524e235a85bf1e18e0"` [INFO] [stderr] Compiling kmer_frequencies v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:15:34 [INFO] [stderr] | [INFO] [stderr] 15 | type MyResult = Result>; [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:15:34 [INFO] [stderr] | [INFO] [stderr] 15 | type MyResult = Result>; [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.41s [INFO] running `"docker" "inspect" "675cea58813d48439a1f61a8df6e7e9f5e4a1df4d4b35d524e235a85bf1e18e0"` [INFO] running `"docker" "rm" "-f" "675cea58813d48439a1f61a8df6e7e9f5e4a1df4d4b35d524e235a85bf1e18e0"` [INFO] [stdout] 675cea58813d48439a1f61a8df6e7e9f5e4a1df4d4b35d524e235a85bf1e18e0 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] b74efcb89cb7ef158559869f7a4e313053b83df36f59ac3be00782655f1afafa [INFO] running `"docker" "start" "-a" "b74efcb89cb7ef158559869f7a4e313053b83df36f59ac3be00782655f1afafa"` [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:15:34 [INFO] [stderr] | [INFO] [stderr] 15 | type MyResult = Result>; [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:15:34 [INFO] [stderr] | [INFO] [stderr] 15 | type MyResult = Result>; [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.24s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/kmer_frequencies-6711fc228cf26e52 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/kmer_frequencies-ae9f02608e978ecc [INFO] [stderr] Doc-tests kmer_frequencies [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "b74efcb89cb7ef158559869f7a4e313053b83df36f59ac3be00782655f1afafa"` [INFO] running `"docker" "rm" "-f" "b74efcb89cb7ef158559869f7a4e313053b83df36f59ac3be00782655f1afafa"` [INFO] [stdout] b74efcb89cb7ef158559869f7a4e313053b83df36f59ac3be00782655f1afafa