[INFO] updating cached repository https://github.com/brainstorm/bio-index-formats [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 21a6254d2bce3ce68aeeee3eb673264cecb036ce [INFO] testing brainstorm/bio-index-formats against master#28742a1146f10a4f09369baad027a464acb7a766 for pr-71274 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fbio-index-formats" "/workspace/builds/worker-0/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/brainstorm/bio-index-formats on toolchain 28742a1146f10a4f09369baad027a464acb7a766 [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/brainstorm/bio-index-formats [INFO] finished tweaking git repo https://github.com/brainstorm/bio-index-formats [INFO] tweaked toml for git repo https://github.com/brainstorm/bio-index-formats written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate git repo https://github.com/brainstorm/bio-index-formats already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] error: the lock file /workspace/builds/worker-0/source/Cargo.lock needs to be updated but --locked was passed to prevent this [INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag. [INFO] the lockfile is outdated, regenerating it [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "build" "--frozen"` [INFO] [stdout] 3c59111e595128bd25cbd4d0a4925c25a40de7a1e86faf0ad4bc505287a0a842 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "3c59111e595128bd25cbd4d0a4925c25a40de7a1e86faf0ad4bc505287a0a842"` [INFO] [stderr] Compiling cfg-if v0.1.9 [INFO] [stderr] Compiling serde v1.0.106 [INFO] [stderr] Compiling nodrop v0.1.14 [INFO] [stderr] Compiling backtrace-sys v0.1.36 [INFO] [stderr] Compiling nom v5.1.1 [INFO] [stderr] Compiling lexical-core v0.6.7 [INFO] [stderr] Compiling serde_derive v1.0.106 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling log v0.4.8 [INFO] [stderr] Compiling arrayvec v0.4.12 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling backtrace v0.3.41 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling rust-htslib v0.26.1 [INFO] [stderr] Compiling bio-types v0.6.0 [INFO] [stderr] Compiling bio_index_formats v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 18s [INFO] running `"docker" "inspect" "3c59111e595128bd25cbd4d0a4925c25a40de7a1e86faf0ad4bc505287a0a842"` [INFO] running `"docker" "rm" "-f" "3c59111e595128bd25cbd4d0a4925c25a40de7a1e86faf0ad4bc505287a0a842"` [INFO] [stdout] 3c59111e595128bd25cbd4d0a4925c25a40de7a1e86faf0ad4bc505287a0a842 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen" "--no-run"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] d61c2db3d019a670642dee7fbb9ccf74f79c331e380e3125611d337c9da6d037 [INFO] running `"docker" "start" "-a" "d61c2db3d019a670642dee7fbb9ccf74f79c331e380e3125611d337c9da6d037"` [INFO] [stderr] Compiling bio_index_formats v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.13s [INFO] running `"docker" "inspect" "d61c2db3d019a670642dee7fbb9ccf74f79c331e380e3125611d337c9da6d037"` [INFO] running `"docker" "rm" "-f" "d61c2db3d019a670642dee7fbb9ccf74f79c331e380e3125611d337c9da6d037"` [INFO] [stdout] d61c2db3d019a670642dee7fbb9ccf74f79c331e380e3125611d337c9da6d037 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 32e3305461b32bad5fc6b9f06b380601b86e30660d3e44b1477919c6330f905d [INFO] running `"docker" "start" "-a" "32e3305461b32bad5fc6b9f06b380601b86e30660d3e44b1477919c6330f905d"` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.38s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bio_index_formats-a55275895674c88b [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test csi::tests::csi_test ... ok [INFO] [stdout] test parser_bai::tests::chunks_test ... ok [INFO] [stdout] test parser_bai::tests::magic_test ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bio_index_formats-8e1677b0458c9dd3 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests bio_index_formats [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "32e3305461b32bad5fc6b9f06b380601b86e30660d3e44b1477919c6330f905d"` [INFO] running `"docker" "rm" "-f" "32e3305461b32bad5fc6b9f06b380601b86e30660d3e44b1477919c6330f905d"` [INFO] [stdout] 32e3305461b32bad5fc6b9f06b380601b86e30660d3e44b1477919c6330f905d