[INFO] updating cached repository https://github.com/Helkafen/vcf_pwm [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] d7feaeac36ca84f23234a7681fc6e815431529da [INFO] testing Helkafen/vcf_pwm against master#28742a1146f10a4f09369baad027a464acb7a766 for pr-71274 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm" "/workspace/builds/worker-4/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Helkafen/vcf_pwm on toolchain 28742a1146f10a4f09369baad027a464acb7a766 [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] finished tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] tweaked toml for git repo https://github.com/Helkafen/vcf_pwm written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/Helkafen/vcf_pwm already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "build" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 3a68dc245faa88d0ad0aac6571d510170d3f5e0c11225cb69d7ce252679a8053 [INFO] running `"docker" "start" "-a" "3a68dc245faa88d0ad0aac6571d510170d3f5e0c11225cb69d7ce252679a8053"` [INFO] [stderr] Compiling cc v1.0.37 [INFO] [stderr] Compiling syn v0.15.39 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling serde v1.0.94 [INFO] [stderr] Compiling autocfg v0.1.4 [INFO] [stderr] Compiling cfg-if v0.1.9 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling pkg-config v0.3.14 [INFO] [stderr] Compiling version_check v0.1.5 [INFO] [stderr] Compiling smallvec v0.6.10 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rustc-demangle v0.1.15 [INFO] [stderr] Compiling termcolor v1.0.5 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling doc-comment v0.3.1 [INFO] [stderr] Compiling ryu v1.0.0 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling unicode-segmentation v1.3.0 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling owning_ref v0.2.4 [INFO] [stderr] Compiling bio v0.28.2 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling smallvec v0.3.4 [INFO] [stderr] Compiling strum v0.13.0 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling crossbeam v0.2.12 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling log v0.4.6 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling unicode-normalization v0.1.8 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling itertools v0.8.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling bit-set v0.5.1 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling backtrace-sys v0.1.30 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling which v3.1.0 [INFO] [stderr] Compiling thread-id v3.3.0 [INFO] [stderr] Compiling subprocess v0.1.18 [INFO] [stderr] Compiling rustc-hash v1.0.1 [INFO] [stderr] Compiling regex-automata v0.1.7 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling parking_lot_core v0.2.14 [INFO] [stderr] Compiling url v2.1.0 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling flate2 v1.0.9 [INFO] [stderr] Compiling backtrace v0.3.32 [INFO] [stderr] Compiling parking_lot v0.3.8 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling bgzip v0.0.3 [INFO] [stderr] Compiling multiqueue v0.3.2 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Compiling which v2.0.1 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling serde_derive v1.0.94 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling strum_macros v0.13.0 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bstr v0.2.1 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling rust-htslib v0.26.1 [INFO] [stderr] Compiling vcf_pwm v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/range.rs:24:9 [INFO] [stderr] | [INFO] [stderr] 24 | (point >= self.start && point <= self.end) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 4m 13s [INFO] running `"docker" "inspect" "3a68dc245faa88d0ad0aac6571d510170d3f5e0c11225cb69d7ce252679a8053"` [INFO] running `"docker" "rm" "-f" "3a68dc245faa88d0ad0aac6571d510170d3f5e0c11225cb69d7ce252679a8053"` [INFO] [stdout] 3a68dc245faa88d0ad0aac6571d510170d3f5e0c11225cb69d7ce252679a8053 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen" "--no-run"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 4be1ed60c8dea179e47265079781ebed10ea25d9f8a90159b6e9692d69a00e58 [INFO] running `"docker" "start" "-a" "4be1ed60c8dea179e47265079781ebed10ea25d9f8a90159b6e9692d69a00e58"` [INFO] [stderr] Compiling arrayvec v0.4.11 [INFO] [stderr] Compiling scopeguard v0.3.3 [INFO] [stderr] Compiling memoffset v0.2.1 [INFO] [stderr] Compiling rayon-core v1.6.0 [INFO] [stderr] Compiling rand_core v0.4.0 [INFO] [stderr] Compiling same-file v1.0.4 [INFO] [stderr] Compiling cast v0.2.2 [INFO] [stderr] Compiling crossbeam-utils v0.6.5 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling serde_json v1.0.40 [INFO] [stderr] Compiling walkdir v2.2.8 [INFO] [stderr] Compiling criterion-plot v0.3.1 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling rand_xoshiro v0.1.0 [INFO] [stderr] Compiling crossbeam-queue v0.1.2 [INFO] [stderr] Compiling crossbeam-epoch v0.7.1 [INFO] [stderr] Compiling crossbeam-deque v0.7.1 [INFO] [stderr] Compiling tinytemplate v1.0.2 [INFO] [stderr] Compiling rayon v1.2.0 [INFO] [stderr] Compiling criterion v0.2.11 [INFO] [stderr] Compiling vcf_pwm v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/range.rs:24:9 [INFO] [stderr] | [INFO] [stderr] 24 | (point >= self.start && point <= self.end) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 39.67s [INFO] running `"docker" "inspect" "4be1ed60c8dea179e47265079781ebed10ea25d9f8a90159b6e9692d69a00e58"` [INFO] running `"docker" "rm" "-f" "4be1ed60c8dea179e47265079781ebed10ea25d9f8a90159b6e9692d69a00e58"` [INFO] [stdout] 4be1ed60c8dea179e47265079781ebed10ea25d9f8a90159b6e9692d69a00e58 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+28742a1146f10a4f09369baad027a464acb7a766" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 835eb38426ec18e12fd5f5191855f6d32581440a0afe895904aa5634ce511ce8 [INFO] running `"docker" "start" "-a" "835eb38426ec18e12fd5f5191855f6d32581440a0afe895904aa5634ce511ce8"` [INFO] [stderr] warning: unnecessary parentheses around block return value [INFO] [stderr] --> src/range.rs:24:9 [INFO] [stderr] | [INFO] [stderr] 24 | (point >= self.start && point <= self.end) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.50s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/vcf_pwm-956f301ff43f1f31 [INFO] [stdout] [INFO] [stdout] running 9 tests [INFO] [stdout] test haplotype::tests::test_patch_haplotype_two_snp ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_snp ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_insert ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_deletion ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_with_no_diff ... ok [INFO] [stdout] test pattern::tests::test_match_gataa ... ok [INFO] [stdout] test pattern::tests::test_matches ... ok [INFO] [stdout] test pattern::tests::test_parse_pwm_files ... FAILED [INFO] [stdout] test pattern::tests::test_parse_threshold ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- pattern::tests::test_parse_pwm_files stdout ---- [INFO] [stdout] thread 'pattern::tests::test_parse_pwm_files' panicked at 'Could not open file thresholds/GATA1_HUMAN.H11MO.1.A.thr: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/pattern.rs:114:16 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x561e66de7524 - backtrace::backtrace::libunwind::trace::hbb4ce8c04526962e [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x561e66de7524 - backtrace::backtrace::trace_unsynchronized::h79251c088e7be038 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x561e66de7524 - std::sys_common::backtrace::_print_fmt::h6b0ea30a9223acae [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x561e66de7524 - ::fmt::h4d51ef07ce58e54b [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x561e66e1114c - core::fmt::write::he16b9c1345d8565e [INFO] [stdout] at src/libcore/fmt/mod.rs:1069 [INFO] [stdout] 5: 0x561e66d6f7e5 - std::io::Write::write_fmt::hc31efe493f037457 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/io/mod.rs:1504 [INFO] [stdout] 6: 0x561e66de1931 - std::io::impls::>::write_fmt::hfcb1ff6c5b834381 [INFO] [stdout] at src/libstd/io/impls.rs:156 [INFO] [stdout] 7: 0x561e66de9df5 - std::sys_common::backtrace::_print::h9288fa7d9f6629cb [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x561e66de9df5 - std::sys_common::backtrace::print::h82e606e62781d8af [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x561e66de9df5 - std::panicking::default_hook::{{closure}}::h1fe350ecbf7604e4 [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x561e66de9adb - std::panicking::default_hook::h1b8b42953fdc841d [INFO] [stdout] at src/libstd/panicking.rs:215 [INFO] [stdout] 11: 0x561e66dea452 - std::panicking::rust_panic_with_hook::he73826f4bb75a21e [INFO] [stdout] at src/libstd/panicking.rs:511 [INFO] [stdout] 12: 0x561e66dea03b - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:419 [INFO] [stdout] 13: 0x561e66e0fb71 - core::panicking::panic_fmt::hc8f9a0b2af5fb585 [INFO] [stdout] at src/libcore/panicking.rs:111 [INFO] [stdout] 14: 0x561e66e0f993 - core::option::expect_none_failed::ha34d57526cca3063 [INFO] [stdout] at src/libcore/option.rs:1268 [INFO] [stdout] 15: 0x561e66d4d3a9 - core::result::Result::expect::h2c7277ba6a93501b [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/result.rs:963 [INFO] [stdout] 16: 0x561e66d49816 - vcf_pwm::pattern::read_lines::hd93dbcacba78378d [INFO] [stdout] at src/pattern.rs:114 [INFO] [stdout] 17: 0x561e66d47660 - vcf_pwm::pattern::parse_threshold_file::h82ad72ec799b8e3e [INFO] [stdout] at src/pattern.rs:19 [INFO] [stdout] 18: 0x561e66d481b3 - vcf_pwm::pattern::parse_pwm_files::h00b4057ec365d4fb [INFO] [stdout] at src/pattern.rs:42 [INFO] [stdout] 19: 0x561e66d54adb - vcf_pwm::pattern::tests::test_parse_pwm_files::hfe1cf3f3e59dd4ab [INFO] [stdout] at src/pattern.rs:174 [INFO] [stdout] 20: 0x561e66d5499a - vcf_pwm::pattern::tests::test_parse_pwm_files::{{closure}}::h8beb2705e416d1f0 [INFO] [stdout] at src/pattern.rs:173 [INFO] [stdout] 21: 0x561e66d68c5e - core::ops::function::FnOnce::call_once::h1faa2a081ddf7cff [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 22: 0x561e66d7b6df - as core::ops::function::FnOnce>::call_once::he1ba1da20629a2d8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 23: 0x561e66d96cde - as core::ops::function::FnOnce<()>>::call_once::hf94927858761de4a [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 24: 0x561e66d96cde - std::panicking::try::do_call::h1585003392664d93 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 25: 0x561e66d96cde - std::panicking::try::h43d950f958a74468 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 26: 0x561e66d96cde - std::panic::catch_unwind::hb5284de2977ddeea [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 27: 0x561e66d96cde - test::run_test_in_process::had39bb305b26a3ae [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 28: 0x561e66d96cde - test::run_test::run_test_inner::{{closure}}::h12b1756b854ada1a [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 29: 0x561e66d6ec96 - std::sys_common::backtrace::__rust_begin_short_backtrace::hec04b80bece92bf9 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 30: 0x561e66d73fb5 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::heca431434c1ac418 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:475 [INFO] [stdout] 31: 0x561e66d73fb5 - as core::ops::function::FnOnce<()>>::call_once::he2457d582c032747 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 32: 0x561e66d73fb5 - std::panicking::try::do_call::hbcd49dc3823e8b28 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 33: 0x561e66d73fb5 - std::panicking::try::h1ba95c07dd8d422b [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 34: 0x561e66d73fb5 - std::panic::catch_unwind::h95854794ba9eee4c [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 35: 0x561e66d73fb5 - std::thread::Builder::spawn_unchecked::{{closure}}::h4e297b8574092d6e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:474 [INFO] [stdout] 36: 0x561e66d73fb5 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h1b855aad7f5ac67e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 37: 0x561e66ddd41f - as core::ops::function::FnOnce>::call_once::h48069b269ca48108 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 38: 0x561e66df0c63 - as core::ops::function::FnOnce>::call_once::heff660b32cd3afd8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 39: 0x561e66df0c63 - std::sys::unix::thread::Thread::new::thread_start::ha538939ed1e2e958 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 40: 0x7fb7577f26db - start_thread [INFO] [stdout] 41: 0x7fb75730388f - __clone [INFO] [stdout] 42: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- pattern::tests::test_parse_threshold stdout ---- [INFO] [stdout] thread 'pattern::tests::test_parse_threshold' panicked at 'Could not open file thresholds/GATA1_HUMAN.H11MO.0.A.thr: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/pattern.rs:114:16 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x561e66de7524 - backtrace::backtrace::libunwind::trace::hbb4ce8c04526962e [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x561e66de7524 - backtrace::backtrace::trace_unsynchronized::h79251c088e7be038 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x561e66de7524 - std::sys_common::backtrace::_print_fmt::h6b0ea30a9223acae [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x561e66de7524 - ::fmt::h4d51ef07ce58e54b [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x561e66e1114c - core::fmt::write::he16b9c1345d8565e [INFO] [stdout] at src/libcore/fmt/mod.rs:1069 [INFO] [stdout] 5: 0x561e66d6f7e5 - std::io::Write::write_fmt::hc31efe493f037457 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/io/mod.rs:1504 [INFO] [stdout] 6: 0x561e66de1931 - std::io::impls::>::write_fmt::hfcb1ff6c5b834381 [INFO] [stdout] at src/libstd/io/impls.rs:156 [INFO] [stdout] 7: 0x561e66de9df5 - std::sys_common::backtrace::_print::h9288fa7d9f6629cb [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x561e66de9df5 - std::sys_common::backtrace::print::h82e606e62781d8af [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x561e66de9df5 - std::panicking::default_hook::{{closure}}::h1fe350ecbf7604e4 [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x561e66de9adb - std::panicking::default_hook::h1b8b42953fdc841d [INFO] [stdout] at src/libstd/panicking.rs:215 [INFO] [stdout] 11: 0x561e66dea452 - std::panicking::rust_panic_with_hook::he73826f4bb75a21e [INFO] [stdout] at src/libstd/panicking.rs:511 [INFO] [stdout] 12: 0x561e66dea03b - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:419 [INFO] [stdout] 13: 0x561e66e0fb71 - core::panicking::panic_fmt::hc8f9a0b2af5fb585 [INFO] [stdout] at src/libcore/panicking.rs:111 [INFO] [stdout] 14: 0x561e66e0f993 - core::option::expect_none_failed::ha34d57526cca3063 [INFO] [stdout] at src/libcore/option.rs:1268 [INFO] [stdout] 15: 0x561e66d4d3a9 - core::result::Result::expect::h2c7277ba6a93501b [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/result.rs:963 [INFO] [stdout] 16: 0x561e66d49816 - vcf_pwm::pattern::read_lines::hd93dbcacba78378d [INFO] [stdout] at src/pattern.rs:114 [INFO] [stdout] 17: 0x561e66d47660 - vcf_pwm::pattern::parse_threshold_file::h82ad72ec799b8e3e [INFO] [stdout] at src/pattern.rs:19 [INFO] [stdout] 18: 0x561e66d56d93 - vcf_pwm::pattern::tests::test_parse_threshold::hc01421422422879e [INFO] [stdout] at src/pattern.rs:199 [INFO] [stdout] 19: 0x561e66d56d3a - vcf_pwm::pattern::tests::test_parse_threshold::{{closure}}::hcc0b3f530c773a20 [INFO] [stdout] at src/pattern.rs:198 [INFO] [stdout] 20: 0x561e66d68d1e - core::ops::function::FnOnce::call_once::h99b8d651d91dce73 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 21: 0x561e66d7b6df - as core::ops::function::FnOnce>::call_once::he1ba1da20629a2d8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 22: 0x561e66d96cde - as core::ops::function::FnOnce<()>>::call_once::hf94927858761de4a [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 23: 0x561e66d96cde - std::panicking::try::do_call::h1585003392664d93 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 24: 0x561e66d96cde - std::panicking::try::h43d950f958a74468 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 25: 0x561e66d96cde - std::panic::catch_unwind::hb5284de2977ddeea [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 26: 0x561e66d96cde - test::run_test_in_process::had39bb305b26a3ae [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 27: 0x561e66d96cde - test::run_test::run_test_inner::{{closure}}::h12b1756b854ada1a [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 28: 0x561e66d6ec96 - std::sys_common::backtrace::__rust_begin_short_backtrace::hec04b80bece92bf9 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 29: 0x561e66d73fb5 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::heca431434c1ac418 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:475 [INFO] [stdout] 30: 0x561e66d73fb5 - as core::ops::function::FnOnce<()>>::call_once::he2457d582c032747 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:318 [INFO] [stdout] 31: 0x561e66d73fb5 - std::panicking::try::do_call::hbcd49dc3823e8b28 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:331 [INFO] [stdout] 32: 0x561e66d73fb5 - std::panicking::try::h1ba95c07dd8d422b [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panicking.rs:274 [INFO] [stdout] 33: 0x561e66d73fb5 - std::panic::catch_unwind::h95854794ba9eee4c [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/panic.rs:394 [INFO] [stdout] 34: 0x561e66d73fb5 - std::thread::Builder::spawn_unchecked::{{closure}}::h4e297b8574092d6e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libstd/thread/mod.rs:474 [INFO] [stdout] 35: 0x561e66d73fb5 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h1b855aad7f5ac67e [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/libcore/ops/function.rs:232 [INFO] [stdout] 36: 0x561e66ddd41f - as core::ops::function::FnOnce>::call_once::h48069b269ca48108 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 37: 0x561e66df0c63 - as core::ops::function::FnOnce>::call_once::heff660b32cd3afd8 [INFO] [stdout] at /rustc/28742a1146f10a4f09369baad027a464acb7a766/src/liballoc/boxed.rs:1008 [INFO] [stdout] 38: 0x561e66df0c63 - std::sys::unix::thread::Thread::new::thread_start::ha538939ed1e2e958 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 39: 0x7fb7577f26db - start_thread [INFO] [stdout] 40: 0x7fb75730388f - __clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] pattern::tests::test_parse_pwm_files [INFO] [stdout] pattern::tests::test_parse_threshold [INFO] [stdout] [INFO] [stdout] test result: FAILED. 7 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin vcf_pwm' [INFO] running `"docker" "inspect" "835eb38426ec18e12fd5f5191855f6d32581440a0afe895904aa5634ce511ce8"` [INFO] running `"docker" "rm" "-f" "835eb38426ec18e12fd5f5191855f6d32581440a0afe895904aa5634ce511ce8"` [INFO] [stdout] 835eb38426ec18e12fd5f5191855f6d32581440a0afe895904aa5634ce511ce8