[INFO] updating cached repository https://github.com/Mimerme/Mimerme
[INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"`
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] df63a69dd00123b2eb2ab3520f84fe54a79a107d
[INFO] checking Mimerme/Mimerme against master#209b2be09fcaff937480d1fbbe8b31646e361c7a for pr-70917
[INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme" "/workspace/builds/worker-11/source"`
[INFO] [stderr] Cloning into '/workspace/builds/worker-11/source'...
[INFO] [stderr] done.
[INFO] [stderr] Checking out files:  67% (21/31)   
Checking out files:  70% (22/31)   
Checking out files:  74% (23/31)   
Checking out files:  77% (24/31)   
Checking out files:  80% (25/31)   
Checking out files:  83% (26/31)   
Checking out files:  87% (27/31)   
Checking out files:  90% (28/31)   
Checking out files:  93% (29/31)   
Checking out files:  96% (30/31)   
Checking out files: 100% (31/31)   
Checking out files: 100% (31/31), done.
[INFO] validating manifest of git repo https://github.com/Mimerme/Mimerme on toolchain 209b2be09fcaff937480d1fbbe8b31646e361c7a
[INFO] running `"/workspace/cargo-home/bin/cargo" "+209b2be09fcaff937480d1fbbe8b31646e361c7a" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] finished tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] tweaked toml for git repo https://github.com/Mimerme/Mimerme written to /workspace/builds/worker-11/source/Cargo.toml
[INFO] crate git repo https://github.com/Mimerme/Mimerme already has a lockfile, it will not be regenerated
[INFO] running `"/workspace/cargo-home/bin/cargo" "+209b2be09fcaff937480d1fbbe8b31646e361c7a" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+209b2be09fcaff937480d1fbbe8b31646e361c7a" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 558db7616825bc3aeab820f12d0f39822bedf25cee63e49da85576773e3fe7c5
[INFO] running `"docker" "start" "-a" "558db7616825bc3aeab820f12d0f39822bedf25cee63e49da85576773e3fe7c5"`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling bindgen v0.53.2
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking itertools v0.8.2
[INFO] [stderr]    Compiling clang-sys v0.29.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling snafu-derive v0.6.3
[INFO] [stderr]     Checking serde v1.0.105
[INFO] [stderr]     Checking snafu v0.6.0
[INFO] [stderr]     Checking bio-types v0.6.0
[INFO] [stderr]     Checking bincode v1.2.1
[INFO] [stderr]    Compiling hts-sys v1.10.2
[INFO] [stderr] error: failed to run custom build command for `hts-sys v1.10.2`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/hts-sys-d32656e7622d31f3/build-script-build` (exit code: 101)
[INFO] [stderr] --- stdout
[INFO] [stderr] OPT_LEVEL = Some("0")
[INFO] [stderr] TARGET = Some("x86_64-unknown-linux-gnu")
[INFO] [stderr] HOST = Some("x86_64-unknown-linux-gnu")
[INFO] [stderr] CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr] CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr] HOST_CC = None
[INFO] [stderr] CC = None
[INFO] [stderr] CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr] CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr] HOST_CFLAGS = None
[INFO] [stderr] CFLAGS = None
[INFO] [stderr] CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr] DEBUG = Some("true")
[INFO] [stderr] echo '/* Default config.h generated by Makefile */' > config.h
[INFO] [stderr] echo '#ifndef __APPLE__' >> config.h
[INFO] [stderr] echo '#define HAVE_LZMA_H 1' >> config.h
[INFO] [stderr] echo '#endif' >> config.h
[INFO] [stderr] echo '#define HAVE_DRAND48 1' >> config.h
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o kfunc.o kfunc.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o knetfile.o knetfile.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o kstring.o kstring.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o bcf_sr_sort.o bcf_sr_sort.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o bgzf.o bgzf.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o errmod.o errmod.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o faidx.o faidx.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o header.o header.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o hfile.o hfile.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o hfile_net.o hfile_net.c
[INFO] [stderr] echo '#define HTS_VERSION_TEXT "1.10.2"' > version.h
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o hts.o hts.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o hts_os.o hts_os.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o md5.o md5.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o multipart.o multipart.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o probaln.o probaln.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o realn.o realn.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o regidx.o regidx.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o region.o region.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o sam.o sam.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o synced_bcf_reader.o synced_bcf_reader.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o vcf_sweep.o vcf_sweep.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o tbx.o tbx.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o textutils.o textutils.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o thread_pool.o thread_pool.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o vcf.o vcf.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o vcfutils.o vcfutils.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_codecs.o cram/cram_codecs.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_decode.o cram/cram_decode.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_encode.o cram/cram_encode.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_external.o cram/cram_external.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_index.o cram/cram_index.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_io.o cram/cram_io.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_samtools.o cram/cram_samtools.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/cram_stats.o cram/cram_stats.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/mFILE.o cram/mFILE.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/open_trace_file.o cram/open_trace_file.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/pooled_alloc.o cram/pooled_alloc.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/rANS_static.o cram/rANS_static.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o cram/string_alloc.o cram/string_alloc.c
[INFO] [stderr] cc -ffunction-sections -fdata-sections -fPIC -g -fno-omit-frame-pointer -m64 -static -I.  -c -o hfile_libcurl.o hfile_libcurl.c
[INFO] [stderr] Makefile:133: recipe for target 'hfile_libcurl.o' failed
[INFO] [stderr] 
[INFO] [stderr] --- stderr
[INFO] [stderr] hfile_libcurl.c:47:10: fatal error: curl/curl.h: No such file or directory
[INFO] [stderr]  #include <curl/curl.h>
[INFO] [stderr]           ^~~~~~~~~~~~~
[INFO] [stderr] compilation terminated.
[INFO] [stderr] make: *** [hfile_libcurl.o] Error 1
[INFO] [stderr] thread 'main' panicked at 'failed to build htslib', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hts-sys-1.10.2/build.rs:86:9
[INFO] [stderr] stack backtrace:
[INFO] [stderr]    0:     0x55b556cc99b4 - backtrace::backtrace::libunwind::trace::h9e598fcb10d5c4f5
[INFO] [stderr]                                at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86
[INFO] [stderr]    1:     0x55b556cc99b4 - backtrace::backtrace::trace_unsynchronized::hbfbd58fbb4a2603e
[INFO] [stderr]                                at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66
[INFO] [stderr]    2:     0x55b556cc99b4 - std::sys_common::backtrace::_print_fmt::hacb596a8013761df
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:78
[INFO] [stderr]    3:     0x55b556cc99b4 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::ha1ba73c9085723eb
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:59
[INFO] [stderr]    4:     0x55b556cf677c - core::fmt::write::hb4ac1e8a8c800611
[INFO] [stderr]                                at src/libcore/fmt/mod.rs:1069
[INFO] [stderr]    5:     0x55b556cc5563 - std::io::Write::write_fmt::ha413e6029f4d499f
[INFO] [stderr]                                at src/libstd/io/mod.rs:1504
[INFO] [stderr]    6:     0x55b556ccca55 - std::sys_common::backtrace::_print::h5afa8b3832cd03b8
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:62
[INFO] [stderr]    7:     0x55b556ccca55 - std::sys_common::backtrace::print::h49229e3486b70f83
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:49
[INFO] [stderr]    8:     0x55b556ccca55 - std::panicking::default_hook::{{closure}}::hcfefd5f4943f3aa9
[INFO] [stderr]                                at src/libstd/panicking.rs:198
[INFO] [stderr]    9:     0x55b556ccc792 - std::panicking::default_hook::h4c2b6d8d034c53de
[INFO] [stderr]                                at src/libstd/panicking.rs:218
[INFO] [stderr]   10:     0x55b556ccd0b2 - std::panicking::rust_panic_with_hook::hf8cee70c0118d2cc
[INFO] [stderr]                                at src/libstd/panicking.rs:511
[INFO] [stderr]   11:     0x55b5566d3161 - std::panicking::begin_panic::ha11b18ee5ded0211
[INFO] [stderr]                                at /rustc/209b2be09fcaff937480d1fbbe8b31646e361c7a/src/libstd/panicking.rs:438
[INFO] [stderr]   12:     0x55b55667bfdc - build_script_build::main::hcde958f1a34ec094
[INFO] [stderr]                                at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hts-sys-1.10.2/build.rs:86
[INFO] [stderr]   13:     0x55b55667e74b - std::rt::lang_start::{{closure}}::h4476be94e8ccc109
[INFO] [stderr]                                at /rustc/209b2be09fcaff937480d1fbbe8b31646e361c7a/src/libstd/rt.rs:67
[INFO] [stderr]   14:     0x55b556ccd5c8 - std::rt::lang_start_internal::{{closure}}::h4c4631d379953dd0
[INFO] [stderr]                                at src/libstd/rt.rs:52
[INFO] [stderr]   15:     0x55b556ccd5c8 - std::panicking::try::do_call::hc26b3db2421dedbb
[INFO] [stderr]                                at src/libstd/panicking.rs:331
[INFO] [stderr]   16:     0x55b556ccd5c8 - std::panicking::try::h4da6835c8705b8a7
[INFO] [stderr]                                at src/libstd/panicking.rs:274
[INFO] [stderr]   17:     0x55b556ccd5c8 - std::panic::catch_unwind::h02aff520273fa6b1
[INFO] [stderr]                                at src/libstd/panic.rs:394
[INFO] [stderr]   18:     0x55b556ccd5c8 - std::rt::lang_start_internal::he0572ca212cb5ef4
[INFO] [stderr]                                at src/libstd/rt.rs:51
[INFO] [stderr]   19:     0x55b55667e727 - std::rt::lang_start::h54c7acb5cae8295d
[INFO] [stderr]                                at /rustc/209b2be09fcaff937480d1fbbe8b31646e361c7a/src/libstd/rt.rs:67
[INFO] [stderr]   20:     0x55b55667d2aa - main
[INFO] [stderr]   21:     0x7f47f4ad1b97 - __libc_start_main
[INFO] [stderr]   22:     0x55b55667ac6a - _start
[INFO] [stderr]   23:                0x0 - <unknown>
[INFO] [stderr] 
[INFO] running `"docker" "inspect" "558db7616825bc3aeab820f12d0f39822bedf25cee63e49da85576773e3fe7c5"`
[INFO] running `"docker" "rm" "-f" "558db7616825bc3aeab820f12d0f39822bedf25cee63e49da85576773e3fe7c5"`
[INFO] [stdout] 558db7616825bc3aeab820f12d0f39822bedf25cee63e49da85576773e3fe7c5
