[INFO] crate flann-sys 0.1.0 is already in cache
[INFO] checking flann-sys-0.1.0 against master#bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc for pr-70917
[INFO] extracting crate flann-sys 0.1.0 into /workspace/builds/worker-2/source
[INFO] validating manifest of crates.io crate flann-sys 0.1.0 on toolchain bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc
[INFO] running `"/workspace/cargo-home/bin/cargo" "+bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking crates.io crate flann-sys 0.1.0
[INFO] finished tweaking crates.io crate flann-sys 0.1.0
[INFO] tweaked toml for crates.io crate flann-sys 0.1.0 written to /workspace/builds/worker-2/source/Cargo.toml
[INFO] running `"/workspace/cargo-home/bin/cargo" "+bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"`
[INFO] running `"/workspace/cargo-home/bin/cargo" "+bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 0c1c915133fbae12cd857f0c1393fcd178ea58e06f3b11ae3dc469c90d482906
[INFO] running `"docker" "start" "-a" "0c1c915133fbae12cd857f0c1393fcd178ea58e06f3b11ae3dc469c90d482906"`
[INFO] [stderr]    Compiling libloading v0.4.3
[INFO] [stderr]    Compiling ucd-util v0.1.8
[INFO] [stderr]    Compiling utf8-ranges v1.0.4
[INFO] [stderr]    Compiling bindgen v0.32.3
[INFO] [stderr]    Compiling clang-sys v0.21.2
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling memchr v1.0.2
[INFO] [stderr]    Compiling which v1.0.5
[INFO] [stderr]    Compiling nom v3.2.1
[INFO] [stderr]    Compiling regex-syntax v0.5.6
[INFO] [stderr]    Compiling aho-corasick v0.6.10
[INFO] [stderr]    Compiling cexpr v0.2.3
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]    Compiling env_logger v0.4.3
[INFO] [stderr]    Compiling flann-sys v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] error: failed to run custom build command for `flann-sys v0.1.0 (/opt/rustwide/workdir)`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/flann-sys-fb76dad9bf1a3c0a/build-script-build` (exit code: 101)
[INFO] [stderr] --- stdout
[INFO] [stderr] cargo:rustc-link-lib=gomp
[INFO] [stderr] cargo:rustc-link-lib=stdc++
[INFO] [stderr] running: "cmake" "/opt/rustwide/workdir/flann" "-DBUILD_EXAMPLES=OFF" "-DBUILD_TESTS=OFF" "-DBUILD_DOC=OFF" "-DBUILD_PYTHON_BINDINGS=OFF" "-DBUILD_MATLAB_BINDINGS=OFF" "-DUSE_OPENMP=ON" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/flann-sys-7f1c5bcb0171fec0/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug"
[INFO] [stderr] -- The C compiler identification is GNU 7.5.0
[INFO] [stderr] -- The CXX compiler identification is GNU 7.5.0
[INFO] [stderr] -- Check for working C compiler: /usr/bin/cc
[INFO] [stderr] -- Check for working C compiler: /usr/bin/cc -- works
[INFO] [stderr] -- Detecting C compiler ABI info
[INFO] [stderr] -- Detecting C compiler ABI info - done
[INFO] [stderr] -- Detecting C compile features
[INFO] [stderr] -- Detecting C compile features - done
[INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++
[INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ -- works
[INFO] [stderr] -- Detecting CXX compiler ABI info
[INFO] [stderr] -- Detecting CXX compiler ABI info - done
[INFO] [stderr] -- Detecting CXX compile features
[INFO] [stderr] -- Detecting CXX compile features - done
[INFO] [stderr] -- Found PythonInterp: /usr/bin/python (found version "2.7.17") 
[INFO] [stderr] -- Could NOT find HDF5 (missing: HDF5_LIBRARIES HDF5_INCLUDE_DIRS) (found version "")
[INFO] [stderr] -- Could NOT find GTest (missing: GTEST_LIBRARY GTEST_INCLUDE_DIR GTEST_MAIN_LIBRARY) 
[INFO] [stderr] -- Found OpenMP_C: -fopenmp  
[INFO] [stderr] -- Found OpenMP_CXX: -fopenmp  
[INFO] [stderr] -- Found OpenMP: TRUE   
[INFO] [stderr] -- Install prefix: /opt/rustwide/target/debug/build/flann-sys-7f1c5bcb0171fec0/out
[INFO] [stderr] -- Build type: Debug
[INFO] [stderr] -- Building C bindings: ON
[INFO] [stderr] -- Building examples: OFF
[INFO] [stderr] -- Building tests: OFF
[INFO] [stderr] -- Building documentation: OFF
[INFO] [stderr] -- Building python bindings: OFF
[INFO] [stderr] -- Building matlab bindings: OFF
[INFO] [stderr] -- Building CUDA library: OFF
[INFO] [stderr] -- Using OpenMP support: ON
[INFO] [stderr] -- Using MPI support: OFF
[INFO] [stderr] -- Configuring incomplete, errors occurred!
[INFO] [stderr] See also "/opt/rustwide/target/debug/build/flann-sys-7f1c5bcb0171fec0/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr] --- stderr
[INFO] [stderr] CMake Warning at CMakeLists.txt:78 (message):
[INFO] [stderr]   hdf5 library not found, some tests will not be run
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr] CMake Warning at CMakeLists.txt:117 (message):
[INFO] [stderr]   gtest library not found, some tests will not be run
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr] CMake Warning (dev) at /usr/share/cmake-3.10/Modules/FindOpenMP.cmake:310 (if):
[INFO] [stderr]   if given arguments:
[INFO] [stderr] 
[INFO] [stderr]     "TRUE"
[INFO] [stderr] 
[INFO] [stderr]   An argument named "TRUE" appears in a conditional statement.  Policy
[INFO] [stderr]   CMP0012 is not set: if() recognizes numbers and boolean constants.  Run
[INFO] [stderr]   "cmake --help-policy CMP0012" for policy details.  Use the cmake_policy
[INFO] [stderr]   command to set the policy and suppress this warning.
[INFO] [stderr] Call Stack (most recent call first):
[INFO] [stderr]   /usr/share/cmake-3.10/Modules/FindOpenMP.cmake:425 (_OPENMP_GET_SPEC_DATE)
[INFO] [stderr]   CMakeLists.txt:122 (find_package)
[INFO] [stderr] This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr] CMake Warning (dev) at /usr/share/cmake-3.10/Modules/FindOpenMP.cmake:310 (if):
[INFO] [stderr]   if given arguments:
[INFO] [stderr] 
[INFO] [stderr]     "TRUE"
[INFO] [stderr] 
[INFO] [stderr]   An argument named "TRUE" appears in a conditional statement.  Policy
[INFO] [stderr]   CMP0012 is not set: if() recognizes numbers and boolean constants.  Run
[INFO] [stderr]   "cmake --help-policy CMP0012" for policy details.  Use the cmake_policy
[INFO] [stderr]   command to set the policy and suppress this warning.
[INFO] [stderr] Call Stack (most recent call first):
[INFO] [stderr]   /usr/share/cmake-3.10/Modules/FindOpenMP.cmake:425 (_OPENMP_GET_SPEC_DATE)
[INFO] [stderr]   CMakeLists.txt:122 (find_package)
[INFO] [stderr] This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr] CMake Error: Could not open file for write in copy operation /opt/rustwide/workdir/flann/src/cpp/flann/config.h.tmp
[INFO] [stderr] CMake Error: : System Error: Read-only file system
[INFO] [stderr] CMake Error at src/cpp/CMakeLists.txt:5 (configure_file):
[INFO] [stderr]   configure_file Problem configuring file
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr] thread 'main' panicked at '
[INFO] [stderr] command did not execute successfully, got: exit code: 1
[INFO] [stderr] 
[INFO] [stderr] build script failed, must exit now', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.42/src/lib.rs:861:5
[INFO] [stderr] stack backtrace:
[INFO] [stderr]    0:     0x55de52ca9924 - backtrace::backtrace::libunwind::trace::hda902e3a4eb9d449
[INFO] [stderr]                                at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86
[INFO] [stderr]    1:     0x55de52ca9924 - backtrace::backtrace::trace_unsynchronized::h06df0062bb63b7e2
[INFO] [stderr]                                at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66
[INFO] [stderr]    2:     0x55de52ca9924 - std::sys_common::backtrace::_print_fmt::ha5249daf78f399e8
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:78
[INFO] [stderr]    3:     0x55de52ca9924 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h68243ef2eafa8843
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:59
[INFO] [stderr]    4:     0x55de52cd580c - core::fmt::write::h8b50d07b82ae3922
[INFO] [stderr]                                at src/libcore/fmt/mod.rs:1069
[INFO] [stderr]    5:     0x55de52ca5ae3 - std::io::Write::write_fmt::h9a5b9a212b705549
[INFO] [stderr]                                at src/libstd/io/mod.rs:1504
[INFO] [stderr]    6:     0x55de52cac765 - std::sys_common::backtrace::_print::hcd11fe8eb9e7335d
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:62
[INFO] [stderr]    7:     0x55de52cac765 - std::sys_common::backtrace::print::h475286256f91474c
[INFO] [stderr]                                at src/libstd/sys_common/backtrace.rs:49
[INFO] [stderr]    8:     0x55de52cac765 - std::panicking::default_hook::{{closure}}::h2a45e9d6ef27161b
[INFO] [stderr]                                at src/libstd/panicking.rs:198
[INFO] [stderr]    9:     0x55de52cac4a2 - std::panicking::default_hook::h76adec688b27abdd
[INFO] [stderr]                                at src/libstd/panicking.rs:218
[INFO] [stderr]   10:     0x55de52cacdc2 - std::panicking::rust_panic_with_hook::h121f4f2c52efbcbf
[INFO] [stderr]                                at src/libstd/panicking.rs:511
[INFO] [stderr]   11:     0x55de52cac9ab - rust_begin_unwind
[INFO] [stderr]                                at src/libstd/panicking.rs:419
[INFO] [stderr]   12:     0x55de52cac91b - std::panicking::begin_panic_fmt::h5f1d91daa2b5823b
[INFO] [stderr]                                at src/libstd/panicking.rs:373
[INFO] [stderr]   13:     0x55de52722e77 - cmake::fail::hcc47acbc066322f6
[INFO] [stderr]                                at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.42/src/lib.rs:861
[INFO] [stderr]   14:     0x55de527227bc - cmake::run::ha7a441988bb7da88
[INFO] [stderr]                                at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.42/src/lib.rs:839
[INFO] [stderr]   15:     0x55de5271e1c5 - cmake::Config::build::h3fb194cd7badf1ee
[INFO] [stderr]                                at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.42/src/lib.rs:674
[INFO] [stderr]   16:     0x55de527190e2 - build_script_build::main::h737ba2ea032804a9
[INFO] [stderr]                                at /opt/rustwide/workdir/build.rs:30
[INFO] [stderr]   17:     0x55de5271980b - std::rt::lang_start::{{closure}}::h3baf9814e5da499a
[INFO] [stderr]                                at /rustc/bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc/src/libstd/rt.rs:67
[INFO] [stderr]   18:     0x55de52cad208 - std::rt::lang_start_internal::{{closure}}::h15b56bd7f81214ad
[INFO] [stderr]                                at src/libstd/rt.rs:52
[INFO] [stderr]   19:     0x55de52cad208 - std::panicking::try::do_call::hbe8467da291bc822
[INFO] [stderr]                                at src/libstd/panicking.rs:331
[INFO] [stderr]   20:     0x55de52cad208 - std::panicking::try::hde3b5cbc6989304d
[INFO] [stderr]                                at src/libstd/panicking.rs:274
[INFO] [stderr]   21:     0x55de52cad208 - std::panic::catch_unwind::h56844acb323fdd6c
[INFO] [stderr]                                at src/libstd/panic.rs:394
[INFO] [stderr]   22:     0x55de52cad208 - std::rt::lang_start_internal::hae379591a9420b87
[INFO] [stderr]                                at src/libstd/rt.rs:51
[INFO] [stderr]   23:     0x55de527197e7 - std::rt::lang_start::h291d207f85638682
[INFO] [stderr]                                at /rustc/bf1f2eedda4fa02b7c9347dd849ed73ddd43dedc/src/libstd/rt.rs:67
[INFO] [stderr]   24:     0x55de527194ea - main
[INFO] [stderr]   25:     0x7f545568cb97 - __libc_start_main
[INFO] [stderr]   26:     0x55de52718d7a - _start
[INFO] [stderr]   27:                0x0 - <unknown>
[INFO] [stderr] 
[INFO] running `"docker" "inspect" "0c1c915133fbae12cd857f0c1393fcd178ea58e06f3b11ae3dc469c90d482906"`
[INFO] running `"docker" "rm" "-f" "0c1c915133fbae12cd857f0c1393fcd178ea58e06f3b11ae3dc469c90d482906"`
[INFO] [stdout] 0c1c915133fbae12cd857f0c1393fcd178ea58e06f3b11ae3dc469c90d482906
