[INFO] updating cached repository https://github.com/10XGenomics/vartrix [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] [stderr] From https://github.com/10XGenomics/vartrix [INFO] [stderr] - [deleted] (none) -> pmarks/container-build [INFO] [stderr] - [deleted] (none) -> sj/container-build [INFO] [stderr] - [deleted] (none) -> verdedave-patch-3 [INFO] [stderr] 4948ba4..ee58dab master -> master [INFO] [stderr] * [new tag] v1.1.15 -> v1.1.15 [INFO] [stderr] * [new tag] v1.1.16 -> v1.1.16 [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] ee58dab610c5be5e8605aa913610eb510f49f1b6 [INFO] checking 10XGenomics/vartrix against try#3ae4c050387df9f7fbb379ee90ce8bf05e566870 for pr-70872 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix" "/workspace/builds/worker-7/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/10XGenomics/vartrix on toolchain 3ae4c050387df9f7fbb379ee90ce8bf05e566870 [INFO] running `"/workspace/cargo-home/bin/cargo" "+3ae4c050387df9f7fbb379ee90ce8bf05e566870" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/10XGenomics/vartrix [INFO] finished tweaking git repo https://github.com/10XGenomics/vartrix [INFO] tweaked toml for git repo https://github.com/10XGenomics/vartrix written to /workspace/builds/worker-7/source/Cargo.toml [INFO] crate git repo https://github.com/10XGenomics/vartrix already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+3ae4c050387df9f7fbb379ee90ce8bf05e566870" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+3ae4c050387df9f7fbb379ee90ce8bf05e566870" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6f1f9b2bd97066e11c1d6c0ec0d2b1a1846fdabbd15ec45cfa71a70f8dcf6273 [INFO] running `"docker" "start" "-a" "6f1f9b2bd97066e11c1d6c0ec0d2b1a1846fdabbd15ec45cfa71a70f8dcf6273"` [INFO] [stderr] Compiling bindgen v0.52.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling bio v0.30.0 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling lzma-sys v0.1.15 [INFO] [stderr] Checking itertools v0.8.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Checking terminal_size v0.1.8 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling bv v0.11.0 [INFO] [stderr] Checking url v2.1.1 [INFO] [stderr] Checking term v0.5.2 [INFO] [stderr] Checking uuid v0.6.5 [INFO] [stderr] Compiling syn v1.0.5 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking regex v1.3.1 [INFO] [stderr] Checking chrono v0.4.9 [INFO] [stderr] Checking alga v0.5.4 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Checking statrs v0.11.0 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling clang-sys v0.28.1 [INFO] [stderr] Checking ndarray v0.12.1 [INFO] [stderr] Checking simplelog v0.5.3 [INFO] [stderr] Checking os_type v2.2.0 [INFO] [stderr] Compiling cexpr v0.3.6 [INFO] [stderr] Checking failure v0.1.5 [INFO] [stderr] Checking rayon-core v1.6.0 [INFO] [stderr] Checking rayon v1.2.0 [INFO] [stderr] Checking snafu v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.101 [INFO] [stderr] Compiling snafu-derive v0.6.2 [INFO] [stderr] Compiling strum_macros v0.16.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Checking snafu v0.6.0 [INFO] [stderr] Compiling hts-sys v1.9.0 (https://github.com/rust-bio/rust-htslib.git?rev=37533bded4692a78cfe080378a09209b95dc3cca#37533bde) [INFO] [stderr] Checking serde v1.0.101 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking bstr v0.2.8 [INFO] [stderr] Checking toml v0.4.10 [INFO] [stderr] Checking multimap v0.6.0 [INFO] [stderr] Checking sprs v0.6.5 [INFO] [stderr] Checking clap v2.33.0 [INFO] [stderr] Checking csv v1.1.1 [INFO] [stderr] Checking human-panic v1.0.1 [INFO] [stderr] Checking rust-htslib v0.26.1 (https://github.com/rust-bio/rust-htslib.git?rev=37533bded4692a78cfe080378a09209b95dc3cca#37533bde) [INFO] [stderr] Checking vartrix v1.1.14 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 34s [INFO] running `"docker" "inspect" "6f1f9b2bd97066e11c1d6c0ec0d2b1a1846fdabbd15ec45cfa71a70f8dcf6273"` [INFO] running `"docker" "rm" "-f" "6f1f9b2bd97066e11c1d6c0ec0d2b1a1846fdabbd15ec45cfa71a70f8dcf6273"` [INFO] [stdout] 6f1f9b2bd97066e11c1d6c0ec0d2b1a1846fdabbd15ec45cfa71a70f8dcf6273