[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against master#d939f708d960161d23b964309ba68ff207fc0ead for pr-70087 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-9/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain d939f708d960161d23b964309ba68ff207fc0ead [INFO] running `"/workspace/cargo-home/bin/cargo" "+d939f708d960161d23b964309ba68ff207fc0ead" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+d939f708d960161d23b964309ba68ff207fc0ead" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/workspace/cargo-home/bin/cargo" "+d939f708d960161d23b964309ba68ff207fc0ead" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+d939f708d960161d23b964309ba68ff207fc0ead" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 1f48c776343eece40c931415fb1cc75a46056fb666227aa0e85073a021722a0c [INFO] running `"docker" "start" "-a" "1f48c776343eece40c931415fb1cc75a46056fb666227aa0e85073a021722a0c"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-b9d8a01aa9316233/build_script_build-b9d8a01aa9316233.build_script_build.c91o2xps-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-b9d8a01aa9316233/build_script_build-b9d8a01aa9316233.build_script_build.c91o2xps-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-b9d8a01aa9316233/build_script_build-b9d8a01aa9316233.build_script_build.c91o2xps-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-b9d8a01aa9316233/build_script_build-b9d8a01aa9316233.build_script_build.c91o2xps-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-b9d8a01aa9316233/build_script_build-b9d8a01aa9316233.build_script_build.c91o2xps-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-b9d8a01aa9316233/build_script_build-b9d8a01aa9316233" "/opt/rustwide/target/debug/build/hdf5-rs-b9d8a01aa9316233/build_script_build-b9d8a01aa9316233.1v3hc1bduhtgwg27.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-d629c0b12c330140.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-8332f43b6cd7f614.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-e4fcc222aff7e7ca.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-75fae7a595eaefa3.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-8c2debe0d8cd340f.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-ae43b40699f76079.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-66d46cf47c8c0283.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-ea0c388ca4b027cc.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-1acfed797f09d750.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-767f9022183b9b5e.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-a6ae8a6b9992d1ed.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-48a13ca3ced7d923.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-0d6cdcc46704b1d2.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-de558d15227716fc.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-137a0b432463828d.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-8625993d1e1c0cfc/build_script_build-8625993d1e1c0cfc.build_script_build.8o7llndj-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8625993d1e1c0cfc/build_script_build-8625993d1e1c0cfc.build_script_build.8o7llndj-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8625993d1e1c0cfc/build_script_build-8625993d1e1c0cfc.build_script_build.8o7llndj-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8625993d1e1c0cfc/build_script_build-8625993d1e1c0cfc.build_script_build.8o7llndj-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8625993d1e1c0cfc/build_script_build-8625993d1e1c0cfc.build_script_build.8o7llndj-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-8625993d1e1c0cfc/build_script_build-8625993d1e1c0cfc" "/opt/rustwide/target/debug/build/libhdf5-sys-8625993d1e1c0cfc/build_script_build-8625993d1e1c0cfc.oh2dqksd7q3iekc.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-d629c0b12c330140.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-8332f43b6cd7f614.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-e4fcc222aff7e7ca.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-75fae7a595eaefa3.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-8c2debe0d8cd340f.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-ae43b40699f76079.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-66d46cf47c8c0283.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-ea0c388ca4b027cc.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-1acfed797f09d750.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-767f9022183b9b5e.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-a6ae8a6b9992d1ed.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-48a13ca3ced7d923.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-0d6cdcc46704b1d2.rlib" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-de558d15227716fc.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/d939f708d960161d23b964309ba68ff207fc0ead/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-137a0b432463828d.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "1f48c776343eece40c931415fb1cc75a46056fb666227aa0e85073a021722a0c"` [INFO] running `"docker" "rm" "-f" "1f48c776343eece40c931415fb1cc75a46056fb666227aa0e85073a021722a0c"` [INFO] [stdout] 1f48c776343eece40c931415fb1cc75a46056fb666227aa0e85073a021722a0c