[INFO] crate hdf5-rs 0.2.0 is already in cache
[INFO] checking hdf5-rs-0.2.0 against master#e2223c94bf433fc38234d1303e88cbaf14755863 for pr-69548
[INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-3/source
[INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain e2223c94bf433fc38234d1303e88cbaf14755863
[INFO] running `"/workspace/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0
[INFO] finished tweaking crates.io crate hdf5-rs 0.2.0
[INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-3/source/Cargo.toml
[INFO] running `"/workspace/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"`
[INFO] running `"/workspace/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] d129b85768e0bb2e2878c6992f6c4864ad459c31621fcfe8f1a7055911ae44aa
[INFO] running `"docker" "start" "-a" "d129b85768e0bb2e2878c6992f6c4864ad459c31621fcfe8f1a7055911ae44aa"`
[INFO] [stderr]    Compiling libhdf5-lib v0.2.0
[INFO] [stderr]     Checking remutex v0.1.1
[INFO] [stderr]    Compiling libhdf5-sys v0.2.0
[INFO] [stderr]    Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr] error: linking with `cc` failed: exit code: 1
[INFO] [stderr]   |
[INFO] [stderr]   = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-3e5ea3bd42eff78a/build_script_build-3e5ea3bd42eff78a.build_script_build.4ikbvk4m-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3e5ea3bd42eff78a/build_script_build-3e5ea3bd42eff78a.build_script_build.4ikbvk4m-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3e5ea3bd42eff78a/build_script_build-3e5ea3bd42eff78a.build_script_build.4ikbvk4m-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3e5ea3bd42eff78a/build_script_build-3e5ea3bd42eff78a.build_script_build.4ikbvk4m-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3e5ea3bd42eff78a/build_script_build-3e5ea3bd42eff78a.build_script_build.4ikbvk4m-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-3e5ea3bd42eff78a/build_script_build-3e5ea3bd42eff78a" "/opt/rustwide/target/debug/build/hdf5-rs-3e5ea3bd42eff78a/build_script_build-3e5ea3bd42eff78a.5cxwvzpgombl3pog.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-cd1d148237bc5381.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-4917db114b2c75b6.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-4dd5b8742cc3d539.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-f8520d6c1f350d42.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-227026a897ba5b75.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-f4a3e18de5522da2.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-6874a749e8bdf481.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-64be4f9d565d361e.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-bbd2ca31f8c53e73.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-539af104f15d72bd.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-7e82a6620a32d730.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-e08c4222ee0fd504.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-11bf6cc0ed96ad53.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-9f7348149cc13079.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-780273e0922cbe66.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil"
[INFO] [stderr]   = note: /usr/bin/ld: cannot find -lhdf5
[INFO] [stderr]           collect2: error: ld returned 1 exit status
[INFO] [stderr]           
[INFO] [stderr] 
[INFO] [stderr] error: aborting due to previous error
[INFO] [stderr] 
[INFO] [stderr] error: could not compile `hdf5-rs`.
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: linking with `cc` failed: exit code: 1
[INFO] [stderr]   |
[INFO] [stderr]   = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-9976a5770e7dc1a5/build_script_build-9976a5770e7dc1a5.build_script_build.ybygtnjs-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-9976a5770e7dc1a5/build_script_build-9976a5770e7dc1a5.build_script_build.ybygtnjs-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-9976a5770e7dc1a5/build_script_build-9976a5770e7dc1a5.build_script_build.ybygtnjs-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-9976a5770e7dc1a5/build_script_build-9976a5770e7dc1a5.build_script_build.ybygtnjs-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-9976a5770e7dc1a5/build_script_build-9976a5770e7dc1a5.build_script_build.ybygtnjs-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-9976a5770e7dc1a5/build_script_build-9976a5770e7dc1a5" "/opt/rustwide/target/debug/build/libhdf5-sys-9976a5770e7dc1a5/build_script_build-9976a5770e7dc1a5.582o8lecr29vxty.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-cd1d148237bc5381.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-4917db114b2c75b6.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-4dd5b8742cc3d539.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-f8520d6c1f350d42.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-227026a897ba5b75.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-f4a3e18de5522da2.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-6874a749e8bdf481.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-64be4f9d565d361e.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-bbd2ca31f8c53e73.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-539af104f15d72bd.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-7e82a6620a32d730.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-e08c4222ee0fd504.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-11bf6cc0ed96ad53.rlib" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-9f7348149cc13079.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/e2223c94bf433fc38234d1303e88cbaf14755863/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-780273e0922cbe66.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil"
[INFO] [stderr]   = note: /usr/bin/ld: cannot find -lhdf5
[INFO] [stderr]           collect2: error: ld returned 1 exit status
[INFO] [stderr]           
[INFO] [stderr] 
[INFO] [stderr] error: aborting due to previous error
[INFO] [stderr] 
[INFO] [stderr] error: could not compile `libhdf5-sys`.
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] running `"docker" "inspect" "d129b85768e0bb2e2878c6992f6c4864ad459c31621fcfe8f1a7055911ae44aa"`
[INFO] running `"docker" "rm" "-f" "d129b85768e0bb2e2878c6992f6c4864ad459c31621fcfe8f1a7055911ae44aa"`
[INFO] [stdout] d129b85768e0bb2e2878c6992f6c4864ad459c31621fcfe8f1a7055911ae44aa