[INFO] fetching crate hdf5-derive 0.6.0... [INFO] checking hdf5-derive-0.6.0 against master#e2223c94bf433fc38234d1303e88cbaf14755863 for pr-69548 [INFO] extracting crate hdf5-derive 0.6.0 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate hdf5-derive 0.6.0 on toolchain e2223c94bf433fc38234d1303e88cbaf14755863 [INFO] running `"/workspace/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-derive 0.6.0 [INFO] finished tweaking crates.io crate hdf5-derive 0.6.0 [INFO] tweaked toml for crates.io crate hdf5-derive 0.6.0 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+e2223c94bf433fc38234d1303e88cbaf14755863" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 895a09f6dd3f88ff9af604dd3b5603932b39ffbca0b1dd7e795b111b573faa12 [INFO] running `"docker" "start" "-a" "895a09f6dd3f88ff9af604dd3b5603932b39ffbca0b1dd7e795b111b573faa12"` [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Checking hdf5-types v0.6.0 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Checking syn v0.15.44 [INFO] [stderr] Compiling hdf5-sys v0.6.0 [INFO] [stderr] Compiling hdf5-derive v0.6.0 [INFO] [stderr] Compiling hdf5-derive v0.6.0 (/opt/rustwide/workdir) [INFO] [stderr] Checking rustfix v0.4.6 [INFO] [stderr] Checking ndarray v0.12.1 [INFO] [stderr] Checking compiletest_rs v0.3.26 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-b7ced486e3124654/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x559e084cf524 - backtrace::backtrace::libunwind::trace::h4ca49152e1f35005 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.44/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x559e084cf524 - backtrace::backtrace::trace_unsynchronized::hc386219a292e35b7 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.44/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x559e084cf524 - std::sys_common::backtrace::_print_fmt::hcc8e03acf0b4e191 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x559e084cf524 - ::fmt::h6629260593428da6 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x559e084eed8c - core::fmt::write::h33778cb9fc069ee9 [INFO] [stderr] at src/libcore/fmt/mod.rs:1053 [INFO] [stderr] 5: 0x559e084cc247 - std::io::Write::write_fmt::ha24c398f7cbcf857 [INFO] [stderr] at src/libstd/io/mod.rs:1428 [INFO] [stderr] 6: 0x559e084d1b05 - std::sys_common::backtrace::_print::hc879c3241333a43c [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x559e084d1b05 - std::sys_common::backtrace::print::h20817dd43023ddb9 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x559e084d1b05 - std::panicking::default_hook::{{closure}}::h99b6ca83277c224a [INFO] [stderr] at src/libstd/panicking.rs:204 [INFO] [stderr] 9: 0x559e084d1847 - std::panicking::default_hook::hdf495aaeed5140cc [INFO] [stderr] at src/libstd/panicking.rs:224 [INFO] [stderr] 10: 0x559e084d2112 - std::panicking::rust_panic_with_hook::h455d273bc59e23f1 [INFO] [stderr] at src/libstd/panicking.rs:470 [INFO] [stderr] 11: 0x559e08449341 - std::panicking::begin_panic::h712c7a58d4f1ffdb [INFO] [stderr] at /rustc/e2223c94bf433fc38234d1303e88cbaf14755863/src/libstd/panicking.rs:397 [INFO] [stderr] 12: 0x559e0828af5c - build_script_build::LibrarySearcher::try_locate_hdf5_library::hf6add05fb0e23f3c [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527 [INFO] [stderr] 13: 0x559e0828c34c - build_script_build::main::h25587f87c27173c4 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:605 [INFO] [stderr] 14: 0x559e08298fab - std::rt::lang_start::{{closure}}::hc0c8133ac71a6198 [INFO] [stderr] at /rustc/e2223c94bf433fc38234d1303e88cbaf14755863/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x559e084d1bd3 - std::rt::lang_start_internal::{{closure}}::hb57f5e2d13eee8db [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x559e084d1bd3 - std::panicking::try::do_call::h204ea578757a6ffa [INFO] [stderr] at src/libstd/panicking.rs:303 [INFO] [stderr] 17: 0x559e084d9287 - __rust_maybe_catch_panic [INFO] [stderr] at src/libpanic_unwind/lib.rs:86 [INFO] [stderr] 18: 0x559e084d25b9 - std::panicking::try::hbdab64151e1c9d96 [INFO] [stderr] at src/libstd/panicking.rs:281 [INFO] [stderr] 19: 0x559e084d25b9 - std::panic::catch_unwind::h354b07ea6be5bfc8 [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 20: 0x559e084d25b9 - std::rt::lang_start_internal::h50f05845fa10b1fa [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 21: 0x559e08298f87 - std::rt::lang_start::h5ff9d62effd65109 [INFO] [stderr] at /rustc/e2223c94bf433fc38234d1303e88cbaf14755863/src/libstd/rt.rs:67 [INFO] [stderr] 22: 0x559e0828ce8a - main [INFO] [stderr] 23: 0x7f831ed9bb97 - __libc_start_main [INFO] [stderr] 24: 0x559e082868ba - _start [INFO] [stderr] 25: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "895a09f6dd3f88ff9af604dd3b5603932b39ffbca0b1dd7e795b111b573faa12"` [INFO] running `"docker" "rm" "-f" "895a09f6dd3f88ff9af604dd3b5603932b39ffbca0b1dd7e795b111b573faa12"` [INFO] [stdout] 895a09f6dd3f88ff9af604dd3b5603932b39ffbca0b1dd7e795b111b573faa12