[INFO] updating cached repository https://github.com/10XGenomics/rust-pseudoaligner [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 7df39e186d4352c5c5a8af44262291a4c1c3cea9 [INFO] checking 10XGenomics/rust-pseudoaligner against try#1cdff26b98d4c2377ea6ae8929f1daebbf58f2b0 for pr-69530 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner" "/workspace/builds/worker-6/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-6/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/10XGenomics/rust-pseudoaligner on toolchain 1cdff26b98d4c2377ea6ae8929f1daebbf58f2b0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+1cdff26b98d4c2377ea6ae8929f1daebbf58f2b0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner [INFO] finished tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner [INFO] tweaked toml for git repo https://github.com/10XGenomics/rust-pseudoaligner written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate git repo https://github.com/10XGenomics/rust-pseudoaligner already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+1cdff26b98d4c2377ea6ae8929f1daebbf58f2b0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1cdff26b98d4c2377ea6ae8929f1daebbf58f2b0" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] ae756e7e1e7ec283ea2d4e8d174b90ed47c69ab2a07717384b0e7b1f256edfdf [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "ae756e7e1e7ec283ea2d4e8d174b90ed47c69ab2a07717384b0e7b1f256edfdf"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling syn v1.0.14 [INFO] [stderr] Checking regex-syntax v0.6.13 [INFO] [stderr] Compiling pulldown-cmark v0.2.0 [INFO] [stderr] Compiling log v0.4.8 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling bytecount v0.4.0 [INFO] [stderr] Checking futures-sink v0.3.1 [INFO] [stderr] Checking futures-core v0.3.1 [INFO] [stderr] Checking futures-io v0.3.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking futures-task v0.3.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Checking ordermap v0.3.5 [INFO] [stderr] Compiling bio v0.29.0 [INFO] [stderr] Checking fixedbitset v0.1.9 [INFO] [stderr] Checking termcolor v1.1.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking min-max-heap v1.3.0 [INFO] [stderr] Checking bytecount v0.6.0 [INFO] [stderr] Checking strum v0.16.0 [INFO] [stderr] Checking strsim v0.9.3 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling num-iter v0.1.40 [INFO] [stderr] Compiling num-rational v0.2.3 [INFO] [stderr] Compiling hashbrown v0.6.3 [INFO] [stderr] Compiling backtrace-sys v0.1.32 [INFO] [stderr] Compiling lz4-sys v1.8.3 [INFO] [stderr] Checking wyhash v0.3.0 [INFO] [stderr] Compiling error-chain v0.12.1 [INFO] [stderr] Checking humantime v1.3.0 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Compiling walkdir v2.3.1 [INFO] [stderr] Checking futures-channel v0.3.1 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking bit-set v0.4.0 [INFO] [stderr] Checking miniz_oxide v0.3.5 [INFO] [stderr] Compiling bv v0.11.0 [INFO] [stderr] Checking pretty_assertions v0.5.1 [INFO] [stderr] Compiling proc-macro2 v1.0.8 [INFO] [stderr] Checking petgraph v0.4.13 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking lock_api v0.3.3 [INFO] [stderr] Checking rand v0.5.6 [INFO] [stderr] Checking wait-timeout v0.2.0 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Checking regex-automata v0.1.8 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking flate2 v1.0.13 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Checking aho-corasick v0.7.6 [INFO] [stderr] Compiling tempdir v0.3.7 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking crossbeam-queue v0.2.1 [INFO] [stderr] Checking chrono v0.4.10 [INFO] [stderr] Compiling backtrace v0.3.42 [INFO] [stderr] Checking regex v1.3.3 [INFO] [stderr] Checking statrs v0.11.0 [INFO] [stderr] Checking tempfile v3.1.0 [INFO] [stderr] Checking rusty-fork v0.2.2 [INFO] [stderr] Checking proptest v0.9.5 [INFO] [stderr] Checking num v0.2.1 [INFO] [stderr] Checking env_logger v0.6.2 [INFO] [stderr] Checking pretty_env_logger v0.3.1 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling synstructure v0.12.3 [INFO] [stderr] Checking snafu v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.104 [INFO] [stderr] Compiling proc-macro-hack v0.5.11 [INFO] [stderr] Compiling failure_derive v0.1.6 [INFO] [stderr] Compiling strum_macros v0.16.0 [INFO] [stderr] Checking failure v0.1.6 [INFO] [stderr] Compiling const-random-macro v0.1.8 [INFO] [stderr] Compiling futures-macro v0.3.1 [INFO] [stderr] Checking const-random v0.1.8 [INFO] [stderr] Checking ahash v0.2.18 [INFO] [stderr] Checking futures-util v0.3.1 [INFO] [stderr] Checking futures-executor v0.3.1 [INFO] [stderr] Checking futures v0.3.1 [INFO] [stderr] Compiling serde v1.0.104 [INFO] [stderr] Checking smallvec v0.6.13 [INFO] [stderr] Checking bstr v0.2.10 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking serde_json v1.0.45 [INFO] [stderr] Checking multimap v0.6.0 [INFO] [stderr] Checking bincode v1.2.1 [INFO] [stderr] Checking docopt v1.1.0 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling memoffset v0.5.3 [INFO] [stderr] Compiling parking_lot_core v0.6.2 [INFO] [stderr] Compiling parking_lot v0.9.0 [INFO] [stderr] Compiling cargo_metadata v0.6.4 [INFO] [stderr] Checking crossbeam-epoch v0.8.0 [INFO] [stderr] error[E0415]: identifier `t` is bound more than once in this parameter list [INFO] [stderr] --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/bio-0.29.0/src/data_structures/bit_tree.rs:33:24 [INFO] [stderr] | [INFO] [stderr] 33 | fn operation(t: T, t: T) -> T; [INFO] [stderr] | ^ used as parameter more than once [INFO] [stderr] [INFO] [stderr] Checking crossbeam-deque v0.7.2 [INFO] [stderr] Checking rayon-core v1.7.0 [INFO] [stderr] Checking dashmap v1.2.1 [INFO] [stderr] Compiling skeptic v0.13.4 [INFO] [stderr] Checking rayon v1.3.0 [INFO] [stderr] Compiling lz4 v1.23.1 [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] For more information about this error, try `rustc --explain E0415`. [INFO] [stderr] error: could not compile `bio`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "ae756e7e1e7ec283ea2d4e8d174b90ed47c69ab2a07717384b0e7b1f256edfdf"` [INFO] running `"docker" "rm" "-f" "ae756e7e1e7ec283ea2d4e8d174b90ed47c69ab2a07717384b0e7b1f256edfdf"` [INFO] [stdout] ae756e7e1e7ec283ea2d4e8d174b90ed47c69ab2a07717384b0e7b1f256edfdf