[INFO] updating cached repository https://github.com/10XGenomics/rust-pseudoaligner
[INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"`
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] 7df39e186d4352c5c5a8af44262291a4c1c3cea9
[INFO] checking 10XGenomics/rust-pseudoaligner against master#6d69caba110c0c2fb90180df1cbc8be5033b91d4 for pr-69530
[INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner" "/workspace/builds/worker-5/source"`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/rust-pseudoaligner on toolchain 6d69caba110c0c2fb90180df1cbc8be5033b91d4
[INFO] running `"/workspace/cargo-home/bin/cargo" "+6d69caba110c0c2fb90180df1cbc8be5033b91d4" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] finished tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] tweaked toml for git repo https://github.com/10XGenomics/rust-pseudoaligner written to /workspace/builds/worker-5/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/rust-pseudoaligner already has a lockfile, it will not be regenerated
[INFO] running `"/workspace/cargo-home/bin/cargo" "+6d69caba110c0c2fb90180df1cbc8be5033b91d4" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+6d69caba110c0c2fb90180df1cbc8be5033b91d4" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] f9d15fb7d29b3168bea1b6810ee936d177347de6c14d87124fb6e23586037797
[INFO] running `"docker" "start" "-a" "f9d15fb7d29b3168bea1b6810ee936d177347de6c14d87124fb6e23586037797"`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr]    Compiling memchr v2.3.0
[INFO] [stderr]     Checking regex-syntax v0.6.13
[INFO] [stderr]    Compiling log v0.4.8
[INFO] [stderr]     Checking futures-core v0.3.1
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]     Checking futures-sink v0.3.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling doc-comment v0.3.1
[INFO] [stderr]    Compiling ndarray v0.13.0
[INFO] [stderr]     Checking bit-vec v0.4.4
[INFO] [stderr]     Checking fixedbitset v0.1.9
[INFO] [stderr]    Compiling bio v0.29.0
[INFO] [stderr]     Checking ordermap v0.3.5
[INFO] [stderr]     Checking bytecount v0.6.0
[INFO] [stderr]     Checking strum v0.16.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking strsim v0.9.3
[INFO] [stderr]     Checking min-max-heap v1.3.0
[INFO] [stderr]    Compiling num-integer v0.1.42
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling rand v0.6.5
[INFO] [stderr]    Compiling num-bigint v0.2.6
[INFO] [stderr]    Compiling num-iter v0.1.40
[INFO] [stderr]    Compiling num-rational v0.2.3
[INFO] [stderr]    Compiling lz4-sys v1.8.3
[INFO] [stderr]     Checking wyhash v0.3.0
[INFO] [stderr]    Compiling error-chain v0.12.1
[INFO] [stderr]     Checking itertools v0.7.11
[INFO] [stderr]     Checking futures-channel v0.3.1
[INFO] [stderr]    Compiling bv v0.11.0
[INFO] [stderr]     Checking bit-set v0.4.0
[INFO] [stderr]     Checking pretty_assertions v0.5.1
[INFO] [stderr]     Checking petgraph v0.4.13
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking lock_api v0.3.3
[INFO] [stderr]     Checking rand v0.5.6
[INFO] [stderr]     Checking wait-timeout v0.2.0
[INFO] [stderr]    Compiling getrandom v0.1.14
[INFO] [stderr]    Compiling backtrace-sys v0.1.32
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]    Compiling tempdir v0.3.7
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]    Compiling backtrace v0.3.42
[INFO] [stderr]     Checking aho-corasick v0.7.6
[INFO] [stderr]     Checking csv-core v0.1.6
[INFO] [stderr]    Compiling synstructure v0.12.3
[INFO] [stderr]    Compiling strum_macros v0.16.0
[INFO] [stderr]     Checking chrono v0.4.10
[INFO] [stderr]    Compiling serde v1.0.104
[INFO] [stderr]    Compiling futures-macro v0.3.1
[INFO] [stderr]    Compiling const-random-macro v0.1.8
[INFO] [stderr]     Checking statrs v0.11.0
[INFO] [stderr]     Checking regex v1.3.3
[INFO] [stderr]     Checking tempfile v3.1.0
[INFO] [stderr]     Checking smallvec v0.6.13
[INFO] [stderr]     Checking bstr v0.2.10
[INFO] [stderr]     Checking serde_json v1.0.45
[INFO] [stderr]     Checking multimap v0.6.0
[INFO] [stderr]     Checking vec_map v0.8.1
[INFO] [stderr]     Checking bincode v1.2.1
[INFO] [stderr]     Checking const-random v0.1.8
[INFO] [stderr]    Compiling failure_derive v0.1.6
[INFO] [stderr]     Checking futures-util v0.3.1
[INFO] [stderr]     Checking rusty-fork v0.2.2
[INFO] [stderr]     Checking env_logger v0.6.2
[INFO] [stderr]     Checking bio-types v0.5.1
[INFO] [stderr]     Checking docopt v1.1.0
[INFO] [stderr]     Checking csv v1.1.3
[INFO] [stderr]     Checking ahash v0.2.18
[INFO] [stderr]     Checking num v0.2.1
[INFO] [stderr]     Checking proptest v0.9.5
[INFO] [stderr]     Checking pretty_env_logger v0.3.1
[INFO] [stderr]     Checking hashbrown v0.6.3
[INFO] [stderr]     Checking failure v0.1.6
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]     Checking futures-executor v0.3.1
[INFO] [stderr]     Checking futures v0.3.1
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]    Compiling memoffset v0.5.3
[INFO] [stderr]    Compiling parking_lot_core v0.6.2
[INFO] [stderr]    Compiling parking_lot v0.9.0
[INFO] [stderr]     Checking crossbeam-epoch v0.8.0
[INFO] [stderr]    Compiling cargo_metadata v0.6.4
[INFO] [stderr]     Checking crossbeam-deque v0.7.2
[INFO] [stderr]     Checking rayon-core v1.7.0
[INFO] [stderr]     Checking dashmap v1.2.1
[INFO] [stderr]     Checking rayon v1.3.0
[INFO] [stderr]    Compiling skeptic v0.13.4
[INFO] [stderr]     Checking snafu v0.5.0
[INFO] [stderr]    Compiling lz4 v1.23.1
[INFO] [stderr] error[E0415]: identifier `t` is bound more than once in this parameter list
[INFO] [stderr]   --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/bio-0.29.0/src/data_structures/bit_tree.rs:33:24
[INFO] [stderr]    |
[INFO] [stderr] 33 |     fn operation(t: T, t: T) -> T;
[INFO] [stderr]    |                        ^ used as parameter more than once
[INFO] [stderr] 
[INFO] [stderr]     Checking shardio v0.5.5
[INFO] [stderr]     Checking boomphf v0.5.2
[INFO] [stderr] error: aborting due to previous error
[INFO] [stderr] 
[INFO] [stderr] For more information about this error, try `rustc --explain E0415`.
[INFO] [stderr] error: could not compile `bio`.
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `"docker" "inspect" "f9d15fb7d29b3168bea1b6810ee936d177347de6c14d87124fb6e23586037797"`
[INFO] running `"docker" "rm" "-f" "f9d15fb7d29b3168bea1b6810ee936d177347de6c14d87124fb6e23586037797"`
[INFO] [stdout] f9d15fb7d29b3168bea1b6810ee936d177347de6c14d87124fb6e23586037797