[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against try#e6563ac70cbfd3196492061900e9e9793e065e4d for pr-69410 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain e6563ac70cbfd3196492061900e9e9793e065e4d [INFO] running `"/workspace/cargo-home/bin/cargo" "+e6563ac70cbfd3196492061900e9e9793e065e4d" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+e6563ac70cbfd3196492061900e9e9793e065e4d" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+e6563ac70cbfd3196492061900e9e9793e065e4d" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+e6563ac70cbfd3196492061900e9e9793e065e4d" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 5701314024db44e27d5b6763c6c6f45faa0da55194bf4efd6e70ef68a5d13163 [INFO] running `"docker" "start" "-a" "5701314024db44e27d5b6763c6c6f45faa0da55194bf4efd6e70ef68a5d13163"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-24aa8d7a6039b127/build_script_build-24aa8d7a6039b127.build_script_build.abjv6noo-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-24aa8d7a6039b127/build_script_build-24aa8d7a6039b127.build_script_build.abjv6noo-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-24aa8d7a6039b127/build_script_build-24aa8d7a6039b127.build_script_build.abjv6noo-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-24aa8d7a6039b127/build_script_build-24aa8d7a6039b127.build_script_build.abjv6noo-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-24aa8d7a6039b127/build_script_build-24aa8d7a6039b127.build_script_build.abjv6noo-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-24aa8d7a6039b127/build_script_build-24aa8d7a6039b127" "/opt/rustwide/target/debug/build/libhdf5-sys-24aa8d7a6039b127/build_script_build-24aa8d7a6039b127.2wnhr2rs37k758ah.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-e0a88aaca56bcfa0.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-aa669a3bbc9a8ed6.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-46f1d560ea84281f.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-52316f443b8c7146.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-392c57a54c4e9ed0.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-8c75dae4b03aca02.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-fc6ca589dffcb235.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-68c90812c57e0ff1.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-5aa61d1c8e29ca23.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-755d3edf1ca8ac46.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-db63518ba54a3577.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-41a24e8e926ede8a.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-c6b950808f40d8bf.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-b0ee7e483246a86a.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-1b259a2dd1768d7b.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-6213ac2c2a08d23f/build_script_build-6213ac2c2a08d23f.build_script_build.3zelxfcw-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-6213ac2c2a08d23f/build_script_build-6213ac2c2a08d23f.build_script_build.3zelxfcw-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-6213ac2c2a08d23f/build_script_build-6213ac2c2a08d23f.build_script_build.3zelxfcw-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-6213ac2c2a08d23f/build_script_build-6213ac2c2a08d23f.build_script_build.3zelxfcw-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-6213ac2c2a08d23f/build_script_build-6213ac2c2a08d23f.build_script_build.3zelxfcw-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-6213ac2c2a08d23f/build_script_build-6213ac2c2a08d23f" "/opt/rustwide/target/debug/build/hdf5-rs-6213ac2c2a08d23f/build_script_build-6213ac2c2a08d23f.44l033x4161469bj.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-e0a88aaca56bcfa0.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-aa669a3bbc9a8ed6.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-46f1d560ea84281f.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-52316f443b8c7146.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-392c57a54c4e9ed0.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-8c75dae4b03aca02.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-fc6ca589dffcb235.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-68c90812c57e0ff1.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-5aa61d1c8e29ca23.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-755d3edf1ca8ac46.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-db63518ba54a3577.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-41a24e8e926ede8a.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-c6b950808f40d8bf.rlib" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-b0ee7e483246a86a.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/e6563ac70cbfd3196492061900e9e9793e065e4d/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-1b259a2dd1768d7b.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "5701314024db44e27d5b6763c6c6f45faa0da55194bf4efd6e70ef68a5d13163"` [INFO] running `"docker" "rm" "-f" "5701314024db44e27d5b6763c6c6f45faa0da55194bf4efd6e70ef68a5d13163"` [INFO] [stdout] 5701314024db44e27d5b6763c6c6f45faa0da55194bf4efd6e70ef68a5d13163