[INFO] crate hdf5 0.5.2 is already in cache [INFO] checking hdf5-0.5.2 against try#9ff4d07208097950831ed4ea9d76feb1eafc8baa for pr-69340 [INFO] extracting crate hdf5 0.5.2 into /workspace/builds/worker-9/source [INFO] validating manifest of crates.io crate hdf5 0.5.2 on toolchain 9ff4d07208097950831ed4ea9d76feb1eafc8baa [INFO] running `"/workspace/cargo-home/bin/cargo" "+9ff4d07208097950831ed4ea9d76feb1eafc8baa" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5 0.5.2 [INFO] finished tweaking crates.io crate hdf5 0.5.2 [INFO] tweaked toml for crates.io crate hdf5 0.5.2 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+9ff4d07208097950831ed4ea9d76feb1eafc8baa" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/workspace/cargo-home/bin/cargo" "+9ff4d07208097950831ed4ea9d76feb1eafc8baa" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+9ff4d07208097950831ed4ea9d76feb1eafc8baa" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] 3685ec1e45307a15374ae255503c1f9108a963831a0783ecbaf56a4965b4b51d [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "3685ec1e45307a15374ae255503c1f9108a963831a0783ecbaf56a4965b4b51d"` [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking ascii v0.9.3 [INFO] [stderr] Checking lock_api v0.2.0 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Compiling hdf5-sys v0.5.2 [INFO] [stderr] Compiling hdf5-derive v0.5.2 [INFO] [stderr] Checking hdf5-types v0.5.2 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.5.2` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-1598af582fc581ef/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.5.2/build.rs:528:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55f800155c04 - backtrace::backtrace::libunwind::trace::had147d1beef2f891 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.44/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x55f800155c04 - backtrace::backtrace::trace_unsynchronized::h00d5c46d80cae222 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.44/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55f800155c04 - std::sys_common::backtrace::_print_fmt::h61b2216e788cc4fd [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x55f800155c04 - ::fmt::hce842b1b05c06459 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x55f80017563c - core::fmt::write::h12f00df804919232 [INFO] [stderr] at src/libcore/fmt/mod.rs:1052 [INFO] [stderr] 5: 0x55f8001527b7 - std::io::Write::write_fmt::h30c63d4497dc178e [INFO] [stderr] at src/libstd/io/mod.rs:1428 [INFO] [stderr] 6: 0x55f800158225 - std::sys_common::backtrace::_print::h4522b5a4aaf4bebe [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x55f800158225 - std::sys_common::backtrace::print::h4a1c37cf1ba8e71d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x55f800158225 - std::panicking::default_hook::{{closure}}::h03d6a37c47044188 [INFO] [stderr] at src/libstd/panicking.rs:204 [INFO] [stderr] 9: 0x55f800157f66 - std::panicking::default_hook::h3d8a55b30e59ca14 [INFO] [stderr] at src/libstd/panicking.rs:224 [INFO] [stderr] 10: 0x55f800158832 - std::panicking::rust_panic_with_hook::hd3c7feb9792ccb40 [INFO] [stderr] at src/libstd/panicking.rs:470 [INFO] [stderr] 11: 0x55f80013ed61 - std::panicking::begin_panic::h5498dccfd720fd2d [INFO] [stderr] at /rustc/9ff4d07208097950831ed4ea9d76feb1eafc8baa/src/libstd/panicking.rs:397 [INFO] [stderr] 12: 0x55f7ffefd55c - build_script_build::LibrarySearcher::try_locate_hdf5_library::hed5fe8ca6e9ed713 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.5.2/build.rs:528 [INFO] [stderr] 13: 0x55f7ffefe94c - build_script_build::main::h7d8fd6018bbd11f9 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.5.2/build.rs:606 [INFO] [stderr] 14: 0x55f7fff0bdab - std::rt::lang_start::{{closure}}::h473317beab7bc7ab [INFO] [stderr] at /rustc/9ff4d07208097950831ed4ea9d76feb1eafc8baa/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x55f8001582f3 - std::rt::lang_start_internal::{{closure}}::h1cfae79ed45d7059 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x55f8001582f3 - std::panicking::try::do_call::h81dd83a7d35e97a4 [INFO] [stderr] at src/libstd/panicking.rs:303 [INFO] [stderr] 17: 0x55f80015fa17 - __rust_maybe_catch_panic [INFO] [stderr] at src/libpanic_unwind/lib.rs:86 [INFO] [stderr] 18: 0x55f800158cd9 - std::panicking::try::hbe0c7b6ac911be63 [INFO] [stderr] at src/libstd/panicking.rs:281 [INFO] [stderr] 19: 0x55f800158cd9 - std::panic::catch_unwind::h8e28870cf17685f7 [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 20: 0x55f800158cd9 - std::rt::lang_start_internal::h290c30f410c06c4e [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 21: 0x55f7fff0bd87 - std::rt::lang_start::hd33efe022866fd22 [INFO] [stderr] at /rustc/9ff4d07208097950831ed4ea9d76feb1eafc8baa/src/libstd/rt.rs:67 [INFO] [stderr] 22: 0x55f7ffeff48a - main [INFO] [stderr] 23: 0x7ff8f71f7b97 - __libc_start_main [INFO] [stderr] 24: 0x55f7ffef8e5a - _start [INFO] [stderr] 25: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "3685ec1e45307a15374ae255503c1f9108a963831a0783ecbaf56a4965b4b51d"` [INFO] running `"docker" "rm" "-f" "3685ec1e45307a15374ae255503c1f9108a963831a0783ecbaf56a4965b4b51d"` [INFO] [stdout] 3685ec1e45307a15374ae255503c1f9108a963831a0783ecbaf56a4965b4b51d