[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against master#212aa3ea28d91a97d1e1261709c0b6e6790788e6 for pr-69340 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 212aa3ea28d91a97d1e1261709c0b6e6790788e6 [INFO] running `"/workspace/cargo-home/bin/cargo" "+212aa3ea28d91a97d1e1261709c0b6e6790788e6" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+212aa3ea28d91a97d1e1261709c0b6e6790788e6" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+212aa3ea28d91a97d1e1261709c0b6e6790788e6" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+212aa3ea28d91a97d1e1261709c0b6e6790788e6" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 1c7012b8858622ce1693d06e85b4f1d0bc43191b269ce25181901449ce246f80 [INFO] running `"docker" "start" "-a" "1c7012b8858622ce1693d06e85b4f1d0bc43191b269ce25181901449ce246f80"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-603e12a3b6318655/build_script_build-603e12a3b6318655.build_script_build.aycwaa9q-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-603e12a3b6318655/build_script_build-603e12a3b6318655.build_script_build.aycwaa9q-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-603e12a3b6318655/build_script_build-603e12a3b6318655.build_script_build.aycwaa9q-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-603e12a3b6318655/build_script_build-603e12a3b6318655.build_script_build.aycwaa9q-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-603e12a3b6318655/build_script_build-603e12a3b6318655.build_script_build.aycwaa9q-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-603e12a3b6318655/build_script_build-603e12a3b6318655" "/opt/rustwide/target/debug/build/hdf5-rs-603e12a3b6318655/build_script_build-603e12a3b6318655.1dmdufymgt09kn7v.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-f82337c2f9dca0c0.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-72eb8b195a1d4dcd.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-602cf177c7bfcff9.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-c4b793a91561ca8c.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-ceb34d7248d3cfd0.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-1c5b10953ee9929d.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-f9fbb6d7de609792.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-316b71c26995cd27.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-5425f865616a9cea.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-68102c59630cff2a.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-a9691aca51b2a406.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-8b6384aa3f39a410.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-4c9eefe48671bb88.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-ea081a8a8ea97826.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-e84639cc970316c4.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-2764ffbda039abee/build_script_build-2764ffbda039abee.build_script_build.14t0uo52-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2764ffbda039abee/build_script_build-2764ffbda039abee.build_script_build.14t0uo52-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2764ffbda039abee/build_script_build-2764ffbda039abee.build_script_build.14t0uo52-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2764ffbda039abee/build_script_build-2764ffbda039abee.build_script_build.14t0uo52-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2764ffbda039abee/build_script_build-2764ffbda039abee.build_script_build.14t0uo52-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-2764ffbda039abee/build_script_build-2764ffbda039abee" "/opt/rustwide/target/debug/build/libhdf5-sys-2764ffbda039abee/build_script_build-2764ffbda039abee.3mfkmhppcvs84alu.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-f82337c2f9dca0c0.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-72eb8b195a1d4dcd.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-602cf177c7bfcff9.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-c4b793a91561ca8c.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-ceb34d7248d3cfd0.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-1c5b10953ee9929d.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-f9fbb6d7de609792.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-316b71c26995cd27.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-5425f865616a9cea.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-68102c59630cff2a.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-a9691aca51b2a406.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-8b6384aa3f39a410.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-4c9eefe48671bb88.rlib" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-ea081a8a8ea97826.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/212aa3ea28d91a97d1e1261709c0b6e6790788e6/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-e84639cc970316c4.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "1c7012b8858622ce1693d06e85b4f1d0bc43191b269ce25181901449ce246f80"` [INFO] running `"docker" "rm" "-f" "1c7012b8858622ce1693d06e85b4f1d0bc43191b269ce25181901449ce246f80"` [INFO] [stdout] 1c7012b8858622ce1693d06e85b4f1d0bc43191b269ce25181901449ce246f80