[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against try#c846f8a7dc7af09647f397f047db9cc81acb60bd for pr-69129 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain c846f8a7dc7af09647f397f047db9cc81acb60bd [INFO] running `"/workspace/cargo-home/bin/cargo" "+c846f8a7dc7af09647f397f047db9cc81acb60bd" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+c846f8a7dc7af09647f397f047db9cc81acb60bd" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/workspace/cargo-home/bin/cargo" "+c846f8a7dc7af09647f397f047db9cc81acb60bd" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+c846f8a7dc7af09647f397f047db9cc81acb60bd" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] fb40a1c8e9f377376387a818bffa5104efe6cf1e7f4e42060f97aa1bea121227 [INFO] running `"docker" "start" "-a" "fb40a1c8e9f377376387a818bffa5104efe6cf1e7f4e42060f97aa1bea121227"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-78a73119c8227c1c/build_script_build-78a73119c8227c1c.build_script_build.cktkexhf-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-78a73119c8227c1c/build_script_build-78a73119c8227c1c.build_script_build.cktkexhf-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-78a73119c8227c1c/build_script_build-78a73119c8227c1c.build_script_build.cktkexhf-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-78a73119c8227c1c/build_script_build-78a73119c8227c1c.build_script_build.cktkexhf-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-78a73119c8227c1c/build_script_build-78a73119c8227c1c.build_script_build.cktkexhf-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-78a73119c8227c1c/build_script_build-78a73119c8227c1c" "/opt/rustwide/target/debug/build/hdf5-rs-78a73119c8227c1c/build_script_build-78a73119c8227c1c.1snpc36c63c1bqu8.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-1dfcd34b0e64837f.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-46ecbef92c558c72.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-ad71295c37a631e2.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-23b23fd473e08b3d.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-78eebcc528554cc5.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-e66914096b657c15.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-510c166f8189d967.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-faa63e2bb53f5918.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-f3a430bc790d9e5a.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-f758f0825fde5031.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-e4056c622edaa861.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-f5632f71391bf0dc.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-4be723cce8773fbb.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-7e8a431d77a49a21.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-a264b9b481f71ac4.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-a0fa24c9085149d2/build_script_build-a0fa24c9085149d2.build_script_build.353jeb6q-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-a0fa24c9085149d2/build_script_build-a0fa24c9085149d2.build_script_build.353jeb6q-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-a0fa24c9085149d2/build_script_build-a0fa24c9085149d2.build_script_build.353jeb6q-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-a0fa24c9085149d2/build_script_build-a0fa24c9085149d2.build_script_build.353jeb6q-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-a0fa24c9085149d2/build_script_build-a0fa24c9085149d2.build_script_build.353jeb6q-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-a0fa24c9085149d2/build_script_build-a0fa24c9085149d2" "/opt/rustwide/target/debug/build/libhdf5-sys-a0fa24c9085149d2/build_script_build-a0fa24c9085149d2.4onpv4ij5bsuzwz9.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-1dfcd34b0e64837f.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-46ecbef92c558c72.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-ad71295c37a631e2.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-23b23fd473e08b3d.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-78eebcc528554cc5.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-e66914096b657c15.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-510c166f8189d967.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-faa63e2bb53f5918.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-f3a430bc790d9e5a.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-f758f0825fde5031.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-e4056c622edaa861.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-f5632f71391bf0dc.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-4be723cce8773fbb.rlib" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-7e8a431d77a49a21.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/c846f8a7dc7af09647f397f047db9cc81acb60bd/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-a264b9b481f71ac4.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "fb40a1c8e9f377376387a818bffa5104efe6cf1e7f4e42060f97aa1bea121227"` [INFO] running `"docker" "rm" "-f" "fb40a1c8e9f377376387a818bffa5104efe6cf1e7f4e42060f97aa1bea121227"` [INFO] [stdout] fb40a1c8e9f377376387a818bffa5104efe6cf1e7f4e42060f97aa1bea121227