[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against try#3738e44c8fffe9e1fdfda9304a4df74ce7b29152 for pr-68746 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 3738e44c8fffe9e1fdfda9304a4df74ce7b29152 [INFO] running `"/workspace/cargo-home/bin/cargo" "+3738e44c8fffe9e1fdfda9304a4df74ce7b29152" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+3738e44c8fffe9e1fdfda9304a4df74ce7b29152" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+3738e44c8fffe9e1fdfda9304a4df74ce7b29152" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+3738e44c8fffe9e1fdfda9304a4df74ce7b29152" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] c417a5c9a6d8093a2c86a1d8a9c876ac08367aaf8b9aefe234bc25ec8b869196 [INFO] running `"docker" "start" "-a" "c417a5c9a6d8093a2c86a1d8a9c876ac08367aaf8b9aefe234bc25ec8b869196"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-e49bb6ee27380e44/build_script_build-e49bb6ee27380e44.build_script_build.18nwb6ou-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-e49bb6ee27380e44/build_script_build-e49bb6ee27380e44.build_script_build.18nwb6ou-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-e49bb6ee27380e44/build_script_build-e49bb6ee27380e44.build_script_build.18nwb6ou-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-e49bb6ee27380e44/build_script_build-e49bb6ee27380e44.build_script_build.18nwb6ou-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-e49bb6ee27380e44/build_script_build-e49bb6ee27380e44.build_script_build.18nwb6ou-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-e49bb6ee27380e44/build_script_build-e49bb6ee27380e44" "/opt/rustwide/target/debug/build/libhdf5-sys-e49bb6ee27380e44/build_script_build-e49bb6ee27380e44.3wp0wxho6t5ykar7.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-eac2d9be91654edf.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-4a3f49343540c176.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-44b984f3951822eb.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-e6e6e7360107edba.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-c764a193152eaedd.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-12f8353f4db0629a.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-1232a131ee03fa0a.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-b496bfcb2dff6bd0.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-da1f3dc7a05722c0.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-34b3a332e191e628.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-d8c42d6262d0e2bf.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-86a99d2a6061c879.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-0b244b71d90a2f65.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-8a29dc57862a5c69.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-52dfba804ee0e1d8.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-38c256f1605ff463/build_script_build-38c256f1605ff463.build_script_build.cgyih110-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-38c256f1605ff463/build_script_build-38c256f1605ff463.build_script_build.cgyih110-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-38c256f1605ff463/build_script_build-38c256f1605ff463.build_script_build.cgyih110-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-38c256f1605ff463/build_script_build-38c256f1605ff463.build_script_build.cgyih110-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-38c256f1605ff463/build_script_build-38c256f1605ff463.build_script_build.cgyih110-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-38c256f1605ff463/build_script_build-38c256f1605ff463" "/opt/rustwide/target/debug/build/hdf5-rs-38c256f1605ff463/build_script_build-38c256f1605ff463.x4b7u73fdpu2vvd.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-eac2d9be91654edf.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-4a3f49343540c176.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-44b984f3951822eb.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-e6e6e7360107edba.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-c764a193152eaedd.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-12f8353f4db0629a.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-1232a131ee03fa0a.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-b496bfcb2dff6bd0.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-da1f3dc7a05722c0.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-34b3a332e191e628.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-d8c42d6262d0e2bf.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-86a99d2a6061c879.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-0b244b71d90a2f65.rlib" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-8a29dc57862a5c69.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/3738e44c8fffe9e1fdfda9304a4df74ce7b29152/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-52dfba804ee0e1d8.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "c417a5c9a6d8093a2c86a1d8a9c876ac08367aaf8b9aefe234bc25ec8b869196"` [INFO] running `"docker" "rm" "-f" "c417a5c9a6d8093a2c86a1d8a9c876ac08367aaf8b9aefe234bc25ec8b869196"` [INFO] [stdout] c417a5c9a6d8093a2c86a1d8a9c876ac08367aaf8b9aefe234bc25ec8b869196