[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against master#73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de for pr-68325 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de [INFO] running `"/workspace/cargo-home/bin/cargo" "+73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 4bf03790abafbd400d0335d0908077e2bf6c515429904db23640993f684a2f2b [INFO] running `"docker" "start" "-a" "4bf03790abafbd400d0335d0908077e2bf6c515429904db23640993f684a2f2b"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-b77b70be3bf1d5b1/build_script_build-b77b70be3bf1d5b1.build_script_build.44ma6un8-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b77b70be3bf1d5b1/build_script_build-b77b70be3bf1d5b1.build_script_build.44ma6un8-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b77b70be3bf1d5b1/build_script_build-b77b70be3bf1d5b1.build_script_build.44ma6un8-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b77b70be3bf1d5b1/build_script_build-b77b70be3bf1d5b1.build_script_build.44ma6un8-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b77b70be3bf1d5b1/build_script_build-b77b70be3bf1d5b1.build_script_build.44ma6un8-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-b77b70be3bf1d5b1/build_script_build-b77b70be3bf1d5b1" "/opt/rustwide/target/debug/build/libhdf5-sys-b77b70be3bf1d5b1/build_script_build-b77b70be3bf1d5b1.2twx920g5cbum2ei.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-3edcc14c4a9c15f9.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-ad0dcc815d149849.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-969cbb98b36960e3.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-1c6bdc604270d327.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-4a3c16abfb07bfca.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-02428a92dc7384b2.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-66d88aa8ea84a47d.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-c6cfbbebde68bb49.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-4eab3f1feadd30ca.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-413d47036f8cc5d8.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-062b35c609cc4c4b.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-890da603607e1b79.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-5750c9e47c673ebb.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-4c4987975d800b74.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-c06086d92ae298f7.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-3fc86395af5a8338/build_script_build-3fc86395af5a8338.build_script_build.9uzz26bo-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3fc86395af5a8338/build_script_build-3fc86395af5a8338.build_script_build.9uzz26bo-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3fc86395af5a8338/build_script_build-3fc86395af5a8338.build_script_build.9uzz26bo-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3fc86395af5a8338/build_script_build-3fc86395af5a8338.build_script_build.9uzz26bo-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-3fc86395af5a8338/build_script_build-3fc86395af5a8338.build_script_build.9uzz26bo-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-3fc86395af5a8338/build_script_build-3fc86395af5a8338" "/opt/rustwide/target/debug/build/hdf5-rs-3fc86395af5a8338/build_script_build-3fc86395af5a8338.1ysoij03z2env7fs.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-3edcc14c4a9c15f9.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-ad0dcc815d149849.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-969cbb98b36960e3.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-1c6bdc604270d327.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-4a3c16abfb07bfca.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-02428a92dc7384b2.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-66d88aa8ea84a47d.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-c6cfbbebde68bb49.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-4eab3f1feadd30ca.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-413d47036f8cc5d8.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-062b35c609cc4c4b.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-890da603607e1b79.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-5750c9e47c673ebb.rlib" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-4c4987975d800b74.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/73f76b74efcaf21bd5424d87c66cd6ed7fe5c7de/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-c06086d92ae298f7.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "4bf03790abafbd400d0335d0908077e2bf6c515429904db23640993f684a2f2b"` [INFO] running `"docker" "rm" "-f" "4bf03790abafbd400d0335d0908077e2bf6c515429904db23640993f684a2f2b"` [INFO] [stdout] 4bf03790abafbd400d0335d0908077e2bf6c515429904db23640993f684a2f2b