[INFO] crate hdf5-sys 0.5.2 is already in cache [INFO] checking hdf5-sys-0.5.2 against master#4007d4ef26eab44bdabc2b7574d032152264d3ad for pr-66919 [INFO] extracting crate hdf5-sys 0.5.2 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate hdf5-sys 0.5.2 on toolchain 4007d4ef26eab44bdabc2b7574d032152264d3ad [INFO] running `"/workspace/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-sys 0.5.2 [INFO] finished tweaking crates.io crate hdf5-sys 0.5.2 [INFO] tweaked toml for crates.io crate hdf5-sys 0.5.2 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 61c31ba77ab267659820845432ad9546dbc25f1c848c38ba9896b26be4cb8b65 [INFO] running `"docker" "start" "-a" "61c31ba77ab267659820845432ad9546dbc25f1c848c38ba9896b26be4cb8b65"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling hdf5-sys v0.5.2 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.5.2 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-39c1368a3fcb92fc/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', build.rs:528:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x563143cd4314 - backtrace::backtrace::libunwind::trace::h86a11ecd6abb81ed [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.40/src/backtrace/libunwind.rs:88 [INFO] [stderr] 1: 0x563143cd4314 - backtrace::backtrace::trace_unsynchronized::hb15fe4110e5f85d2 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.40/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x563143cd4314 - std::sys_common::backtrace::_print_fmt::h3fe925aba6fb8a40 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:84 [INFO] [stderr] 3: 0x563143cd4314 - ::fmt::heeb49cad91640f09 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:61 [INFO] [stderr] 4: 0x563143cf325c - core::fmt::write::h8833349fa0c8591c [INFO] [stderr] at src/libcore/fmt/mod.rs:1024 [INFO] [stderr] 5: 0x563143cd1197 - std::io::Write::write_fmt::h04c97778c24a45de [INFO] [stderr] at src/libstd/io/mod.rs:1428 [INFO] [stderr] 6: 0x563143cd646e - std::sys_common::backtrace::_print::h94674bd19992a2fa [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:65 [INFO] [stderr] 7: 0x563143cd646e - std::sys_common::backtrace::print::h96ed28e8e2a34b72 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:50 [INFO] [stderr] 8: 0x563143cd646e - std::panicking::default_hook::{{closure}}::h11c2ff14a155c2b9 [INFO] [stderr] at src/libstd/panicking.rs:193 [INFO] [stderr] 9: 0x563143cd6161 - std::panicking::default_hook::h036f22f28618618b [INFO] [stderr] at src/libstd/panicking.rs:210 [INFO] [stderr] 10: 0x563143cd6aeb - std::panicking::rust_panic_with_hook::hf61d02f6b05d844c [INFO] [stderr] at src/libstd/panicking.rs:471 [INFO] [stderr] 11: 0x563143aaf8c7 - std::panicking::begin_panic::hcbf0d4868d1926a7 [INFO] [stderr] at /rustc/4007d4ef26eab44bdabc2b7574d032152264d3ad/src/libstd/panicking.rs:404 [INFO] [stderr] 12: 0x563143a6cce9 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h4c2878743549db81 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:528 [INFO] [stderr] 13: 0x563143a6dffc - build_script_build::main::h3c6493c8c27700d3 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:606 [INFO] [stderr] 14: 0x563143a7d6b0 - std::rt::lang_start::{{closure}}::h94d5c4cd80820d0c [INFO] [stderr] at /rustc/4007d4ef26eab44bdabc2b7574d032152264d3ad/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x563143cd6533 - std::rt::lang_start_internal::{{closure}}::h8908fde85afe23e2 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x563143cd6533 - std::panicking::try::do_call::h4a6b7fd652bb44be [INFO] [stderr] at src/libstd/panicking.rs:292 [INFO] [stderr] 17: 0x563143cdd55a - __rust_maybe_catch_panic [INFO] [stderr] at src/libpanic_unwind/lib.rs:81 [INFO] [stderr] 18: 0x563143cd6f80 - std::panicking::try::h3a04761f208f0237 [INFO] [stderr] at src/libstd/panicking.rs:270 [INFO] [stderr] 19: 0x563143cd6f80 - std::panic::catch_unwind::hcd13548900b20da0 [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 20: 0x563143cd6f80 - std::rt::lang_start_internal::hcbec06ca7695af54 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 21: 0x563143a7d689 - std::rt::lang_start::hd94845ad5d633ecd [INFO] [stderr] at /rustc/4007d4ef26eab44bdabc2b7574d032152264d3ad/src/libstd/rt.rs:67 [INFO] [stderr] 22: 0x563143a6eb2a - main [INFO] [stderr] 23: 0x7f18e874db97 - __libc_start_main [INFO] [stderr] 24: 0x563143a686ea - _start [INFO] [stderr] 25: 0x0 - [INFO] [stderr] [INFO] running `"docker" "inspect" "61c31ba77ab267659820845432ad9546dbc25f1c848c38ba9896b26be4cb8b65"` [INFO] running `"docker" "rm" "-f" "61c31ba77ab267659820845432ad9546dbc25f1c848c38ba9896b26be4cb8b65"` [INFO] [stdout] 61c31ba77ab267659820845432ad9546dbc25f1c848c38ba9896b26be4cb8b65