[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against master#4007d4ef26eab44bdabc2b7574d032152264d3ad for pr-66919 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-10/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 4007d4ef26eab44bdabc2b7574d032152264d3ad [INFO] running `"/workspace/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-10/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+4007d4ef26eab44bdabc2b7574d032152264d3ad" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] bb8190c454bb8b5c23bd415db9dc010207b711d9ee6eeddbe33f32cbab4b5b32 [INFO] running `"docker" "start" "-a" "bb8190c454bb8b5c23bd415db9dc010207b711d9ee6eeddbe33f32cbab4b5b32"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-fe2f3b916c9d07db/build_script_build-fe2f3b916c9d07db.build_script_build.8hev8ifr-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-fe2f3b916c9d07db/build_script_build-fe2f3b916c9d07db.build_script_build.8hev8ifr-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-fe2f3b916c9d07db/build_script_build-fe2f3b916c9d07db.build_script_build.8hev8ifr-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-fe2f3b916c9d07db/build_script_build-fe2f3b916c9d07db.build_script_build.8hev8ifr-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-fe2f3b916c9d07db/build_script_build-fe2f3b916c9d07db.build_script_build.8hev8ifr-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-fe2f3b916c9d07db/build_script_build-fe2f3b916c9d07db" "/opt/rustwide/target/debug/build/hdf5-rs-fe2f3b916c9d07db/build_script_build-fe2f3b916c9d07db.jjqpvzpzojz3aie.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-8f9e1fcd8d4450ec.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-f667a10190fd8e3f.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-a54e1f74c42cf411.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-5a779db3d169ba6d.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-ebc7061df3adff3b.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-4a48284adbf080fe.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-65fbae7a8c47eee0.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-8f72fecd9393cd18.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-9e4ac184869b1d56.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-510e2b68af34efb1.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-37fb73dbb3a49d92.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-cdd874bacdf1479e.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-7962ef3d0e51d1ce.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-0afec5871bd42a66.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-51a76c947f4b3c0b.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-048d1d07a54d5793/build_script_build-048d1d07a54d5793.build_script_build.89j4634b-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-048d1d07a54d5793/build_script_build-048d1d07a54d5793.build_script_build.89j4634b-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-048d1d07a54d5793/build_script_build-048d1d07a54d5793.build_script_build.89j4634b-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-048d1d07a54d5793/build_script_build-048d1d07a54d5793.build_script_build.89j4634b-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-048d1d07a54d5793/build_script_build-048d1d07a54d5793.build_script_build.89j4634b-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-048d1d07a54d5793/build_script_build-048d1d07a54d5793" "/opt/rustwide/target/debug/build/libhdf5-sys-048d1d07a54d5793/build_script_build-048d1d07a54d5793.4wa4xygqz5fn97ce.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-8f9e1fcd8d4450ec.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-f667a10190fd8e3f.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-a54e1f74c42cf411.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-5a779db3d169ba6d.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-ebc7061df3adff3b.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-4a48284adbf080fe.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-65fbae7a8c47eee0.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-8f72fecd9393cd18.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-9e4ac184869b1d56.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-510e2b68af34efb1.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-37fb73dbb3a49d92.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-cdd874bacdf1479e.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-7962ef3d0e51d1ce.rlib" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-0afec5871bd42a66.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/4007d4ef26eab44bdabc2b7574d032152264d3ad/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-51a76c947f4b3c0b.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "bb8190c454bb8b5c23bd415db9dc010207b711d9ee6eeddbe33f32cbab4b5b32"` [INFO] running `"docker" "rm" "-f" "bb8190c454bb8b5c23bd415db9dc010207b711d9ee6eeddbe33f32cbab4b5b32"` [INFO] [stdout] bb8190c454bb8b5c23bd415db9dc010207b711d9ee6eeddbe33f32cbab4b5b32