[INFO] updating cached repository https://github.com/10XGenomics/rust-pseudoaligner
[INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"`
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] 5f5885487a50acfeaf000756b09c699a7cd42d6e
[INFO] checking 10XGenomics/rust-pseudoaligner against master#fdc0011561c6365c596dfd8fa1ef388162bc89c7 for pr-66504-1
[INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner" "/workspace/builds/worker-1/source"`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/rust-pseudoaligner on toolchain fdc0011561c6365c596dfd8fa1ef388162bc89c7
[INFO] running `"/workspace/cargo-home/bin/cargo" "+fdc0011561c6365c596dfd8fa1ef388162bc89c7" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] finished tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] tweaked toml for git repo https://github.com/10XGenomics/rust-pseudoaligner written to /workspace/builds/worker-1/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/rust-pseudoaligner already has a lockfile, it will not be regenerated
[INFO] running `"/workspace/cargo-home/bin/cargo" "+fdc0011561c6365c596dfd8fa1ef388162bc89c7" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+fdc0011561c6365c596dfd8fa1ef388162bc89c7" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 37ff66fa150ae54785b781f3b240f47205cbc8a3c3e1173d3cbf99c3e8990735
[INFO] running `"docker" "start" "-a" "37ff66fa150ae54785b781f3b240f47205cbc8a3c3e1173d3cbf99c3e8990735"`
[INFO] [stderr]    Compiling log v0.4.8
[INFO] [stderr]    Compiling ndarray v0.13.0
[INFO] [stderr]    Compiling bio v0.29.0
[INFO] [stderr]     Checking min-max-heap v1.2.2
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[INFO] [stderr]     Checking futures-executor-preview v0.3.0-alpha.19
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[INFO] [stderr]    Compiling synstructure v0.12.1
[INFO] [stderr]    Compiling serde_derive v1.0.102
[INFO] [stderr]    Compiling proc-macro-hack v0.5.11
[INFO] [stderr]    Compiling strum_macros v0.16.0
[INFO] [stderr]    Compiling failure_derive v0.1.6
[INFO] [stderr]     Checking failure v0.1.6
[INFO] [stderr]    Compiling const-random-macro v0.1.6
[INFO] [stderr]     Checking const-random v0.1.6
[INFO] [stderr]     Checking ahash v0.2.18
[INFO] [stderr]     Checking hashbrown v0.6.3
[INFO] [stderr]    Compiling serde v1.0.102
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[INFO] [stderr]     Checking bstr v0.2.8
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[INFO] [stderr]     Checking serde_json v1.0.41
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[INFO] [stderr]     Checking bio-types v0.5.1
[INFO] [stderr]     Checking vec_map v0.8.1
[INFO] [stderr]     Checking multimap v0.6.0
[INFO] [stderr]     Checking docopt v1.1.0
[INFO] [stderr]     Checking csv v1.1.1
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]    Compiling memoffset v0.5.2
[INFO] [stderr]    Compiling parking_lot_core v0.6.2
[INFO] [stderr]    Compiling parking_lot v0.9.0
[INFO] [stderr]    Compiling cargo_metadata v0.6.4
[INFO] [stderr]     Checking crossbeam-epoch v0.7.2
[INFO] [stderr]     Checking crossbeam-deque v0.7.1
[INFO] [stderr]     Checking rayon-core v1.6.0
[INFO] [stderr]    Compiling skeptic v0.13.4
[INFO] [stderr]     Checking dashmap v1.2.0
[INFO] [stderr]     Checking rayon v1.2.0
[INFO] [stderr]    Compiling lz4 v1.23.1
[INFO] [stderr]     Checking boomphf v0.5.2
[INFO] [stderr]     Checking shardio v0.5.4
[INFO] [stderr]     Checking debruijn v0.3.0 (https://github.com/10XGenomics/rust-debruijn#55db4965)
[INFO] [stderr]     Checking debruijn_mapping v0.4.0 (/opt/rustwide/workdir)
[INFO] [stderr] warning: unnecessary parentheses around type
[INFO] [stderr]    --> src/mappability.rs:120:67
[INFO] [stderr]     |
[INFO] [stderr] 120 | pub fn analyze_graph<K: Kmer>(index: &Pseudoaligner<K>) -> Result<(Vec<MappabilityRecord>), Error> {
[INFO] [stderr]     |                                                                   ^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_parens)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: use of deprecated item 'debruijn::msp::simple_scan': Please use the `Scanner` type instead 
[INFO] [stderr]    --> src/build_index.rs:249:20
[INFO] [stderr]     |
[INFO] [stderr] 249 |         let msps = debruijn::msp::simple_scan::<_, PmerType>(K::k(), contig, &PERM, false);
[INFO] [stderr]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unnecessary parentheses around type
[INFO] [stderr]    --> src/mappability.rs:120:67
[INFO] [stderr]     |
[INFO] [stderr] 120 | pub fn analyze_graph<K: Kmer>(index: &Pseudoaligner<K>) -> Result<(Vec<MappabilityRecord>), Error> {
[INFO] [stderr]     |                                                                   ^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_parens)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: use of deprecated item 'debruijn::msp::simple_scan': Please use the `Scanner` type instead 
[INFO] [stderr]    --> src/build_index.rs:249:20
[INFO] [stderr]     |
[INFO] [stderr] 249 |         let msps = debruijn::msp::simple_scan::<_, PmerType>(K::k(), contig, &PERM, false);
[INFO] [stderr]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function is never used: `test_gencode_full_build`
[INFO] [stderr]    --> src/build_index.rs:399:8
[INFO] [stderr]     |
[INFO] [stderr] 399 |     fn test_gencode_full_build() -> Result<(), Error> {
[INFO] [stderr]     |        ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 51s
[INFO] running `"docker" "inspect" "37ff66fa150ae54785b781f3b240f47205cbc8a3c3e1173d3cbf99c3e8990735"`
[INFO] running `"docker" "rm" "-f" "37ff66fa150ae54785b781f3b240f47205cbc8a3c3e1173d3cbf99c3e8990735"`
[INFO] [stdout] 37ff66fa150ae54785b781f3b240f47205cbc8a3c3e1173d3cbf99c3e8990735