[INFO] updating cached repository https://github.com/brainstorm/htsget-aws [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 64d0bf01785a75ea6d7c98c850715f187fb1ec06 [INFO] checking brainstorm/htsget-aws against try#d27c6c6a469a28343396a8f3ac1c9d403aabda69 for pr-66037 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-aws" "/workspace/builds/worker-7/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/brainstorm/htsget-aws on toolchain d27c6c6a469a28343396a8f3ac1c9d403aabda69 [INFO] running `"/workspace/cargo-home/bin/cargo" "+d27c6c6a469a28343396a8f3ac1c9d403aabda69" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/brainstorm/htsget-aws [INFO] finished tweaking git repo https://github.com/brainstorm/htsget-aws [INFO] tweaked toml for git repo https://github.com/brainstorm/htsget-aws written to /workspace/builds/worker-7/source/Cargo.toml [INFO] crate git repo https://github.com/brainstorm/htsget-aws already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+d27c6c6a469a28343396a8f3ac1c9d403aabda69" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+d27c6c6a469a28343396a8f3ac1c9d403aabda69" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 9191a989cf54f392999482f85f5d5c617479b2410320c5c08f6e377046abdfdf [INFO] running `"docker" "start" "-a" "9191a989cf54f392999482f85f5d5c617479b2410320c5c08f6e377046abdfdf"` [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Compiling ring v0.16.9 [INFO] [stderr] Compiling lzma-sys v0.1.15 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling proc-macro2 v1.0.4 [INFO] [stderr] Checking signal-hook-registry v1.1.1 [INFO] [stderr] Compiling lambda_runtime_core v0.1.2 [INFO] [stderr] Compiling which v3.0.0 [INFO] [stderr] Compiling rusoto_core v0.41.0 [INFO] [stderr] Compiling backtrace v0.3.38 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Checking tokio-io v0.1.12 [INFO] [stderr] Checking mio-uds v0.6.7 [INFO] [stderr] Checking serde_urlencoded v0.5.5 [INFO] [stderr] Checking parking_lot_core v0.6.2 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Checking chrono v0.4.9 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Checking uuid v0.7.4 [INFO] [stderr] Checking crossbeam-epoch v0.7.2 [INFO] [stderr] Compiling lambda_runtime_errors_derive v0.1.1 [INFO] [stderr] Checking signal-hook v0.1.10 [INFO] [stderr] Checking parking_lot v0.9.0 [INFO] [stderr] Checking failure v0.1.5 [INFO] [stderr] Checking tokio-codec v0.1.1 [INFO] [stderr] Checking h2 v0.1.26 [INFO] [stderr] Checking tokio-reactor v0.1.10 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Checking crossbeam-deque v0.7.1 [INFO] [stderr] Compiling dotenv v0.14.1 [INFO] [stderr] Compiling syn v1.0.5 [INFO] [stderr] Checking tokio-threadpool v0.1.16 [INFO] [stderr] Checking tokio-udp v0.1.5 [INFO] [stderr] Checking tokio-uds v0.2.5 [INFO] [stderr] Checking tokio-tcp v0.1.3 [INFO] [stderr] Checking tokio-signal v0.2.7 [INFO] [stderr] Checking lambda_runtime_errors v0.1.1 [INFO] [stderr] Checking tokio-fs v0.1.6 [INFO] [stderr] Checking tokio-process v0.2.4 [INFO] [stderr] Checking snafu v0.5.0 [INFO] [stderr] Checking tokio v0.1.22 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Checking webpki v0.21.0 [INFO] [stderr] Checking sct v0.6.0 [INFO] [stderr] Checking ct-logs v0.6.0 [INFO] [stderr] Checking hyper v0.12.35 [INFO] [stderr] Checking rustls v0.16.0 [INFO] [stderr] Checking webpki-roots v0.17.0 [INFO] [stderr] Checking tokio-rustls v0.10.2 [INFO] [stderr] Checking hyper-rustls v0.17.1 [INFO] [stderr] Compiling serde_derive v1.0.101 [INFO] [stderr] Compiling proc-macro-hack v0.5.10 [INFO] [stderr] Compiling dotenv_codegen_implementation v0.14.1 [INFO] [stderr] Checking dotenv_codegen v0.14.1 [INFO] [stderr] Compiling rust-htslib v0.26.0 [INFO] [stderr] Checking lambda_runtime_client v0.2.2 [INFO] [stderr] Checking rusoto_credential v0.41.0 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking lambda_runtime v0.2.1 [INFO] [stderr] Checking rusoto_athena v0.41.0 [INFO] [stderr] Checking lambda_http v0.1.1 [INFO] [stderr] Checking htsget v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: unnecessary parentheses around function argument [INFO] [stderr] --> src/data/local.rs:24:12 [INFO] [stderr] | [INFO] [stderr] 24 | Ok((refs)) [INFO] [stderr] | ^^^^^^ help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `dotenv_codegen` [INFO] [stderr] --> src/data/athena.rs:5:5 [INFO] [stderr] | [INFO] [stderr] 5 | use dotenv_codegen; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unnecessary parentheses around function argument [INFO] [stderr] --> src/data/local.rs:24:12 [INFO] [stderr] | [INFO] [stderr] 24 | Ok((refs)) [INFO] [stderr] | ^^^^^^ help: remove these parentheses [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_parens)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `dotenv_codegen` [INFO] [stderr] --> src/data/athena.rs:5:5 [INFO] [stderr] | [INFO] [stderr] 5 | use dotenv_codegen; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `id` [INFO] [stderr] --> src/data/local.rs:21:27 [INFO] [stderr] | [INFO] [stderr] 21 | fn find_by_id (&self, id: ReadsRequest) -> Result, Error> { [INFO] [stderr] | ^^ help: consider prefixing with an underscore: `_id` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `id` [INFO] [stderr] --> src/data/local.rs:21:27 [INFO] [stderr] | [INFO] [stderr] 21 | fn find_by_id (&self, id: ReadsRequest) -> Result, Error> { [INFO] [stderr] | ^^ help: consider prefixing with an underscore: `_id` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: field is never read: `path` [INFO] [stderr] --> src/data/local.rs:7:5 [INFO] [stderr] | [INFO] [stderr] 7 | path: String, [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: field is never read: `object` [INFO] [stderr] --> src/data/local.rs:8:5 [INFO] [stderr] | [INFO] [stderr] 8 | object: String, [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: struct is never constructed: `HtsGetResponse` [INFO] [stderr] --> src/data/mod.rs:23:8 [INFO] [stderr] | [INFO] [stderr] 23 | struct HtsGetResponse { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/data/athena.rs:70:5 [INFO] [stderr] | [INFO] [stderr] 70 | Self::wait_for_results(&self.client, &query_exec_id); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/data/athena.rs:87:5 [INFO] [stderr] | [INFO] [stderr] 87 | dbg!(reads); [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: field is never read: `path` [INFO] [stderr] --> src/data/local.rs:7:5 [INFO] [stderr] | [INFO] [stderr] 7 | path: String, [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: field is never read: `object` [INFO] [stderr] --> src/data/local.rs:8:5 [INFO] [stderr] | [INFO] [stderr] 8 | object: String, [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: struct is never constructed: `HtsGetResponse` [INFO] [stderr] --> src/data/mod.rs:23:8 [INFO] [stderr] | [INFO] [stderr] 23 | struct HtsGetResponse { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/data/athena.rs:70:5 [INFO] [stderr] | [INFO] [stderr] 70 | Self::wait_for_results(&self.client, &query_exec_id); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/data/athena.rs:87:5 [INFO] [stderr] | [INFO] [stderr] 87 | dbg!(reads); [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] error: proc-macro derive panicked [INFO] [stderr] --> src/main.rs:47:20 [INFO] [stderr] | [INFO] [stderr] 47 | let database = dotenv!("AWS_ATHENA_DB").to_string(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: message: Error loading .env file: path not found [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `htsget`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: proc-macro derive panicked [INFO] [stderr] --> src/main.rs:47:20 [INFO] [stderr] | [INFO] [stderr] 47 | let database = dotenv!("AWS_ATHENA_DB").to_string(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: message: Error loading .env file: path not found [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `htsget`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "9191a989cf54f392999482f85f5d5c617479b2410320c5c08f6e377046abdfdf"` [INFO] running `"docker" "rm" "-f" "9191a989cf54f392999482f85f5d5c617479b2410320c5c08f6e377046abdfdf"` [INFO] [stdout] 9191a989cf54f392999482f85f5d5c617479b2410320c5c08f6e377046abdfdf