[INFO] fetching crate diffuse 0.1.1... [INFO] checking diffuse-0.1.1 against master#3aedcf06b73fc36feeebca3d579e1d2a6c40acc5 for pr-65819 [INFO] extracting crate diffuse 0.1.1 into /workspace/builds/worker-9/source [INFO] validating manifest of crates.io crate diffuse 0.1.1 on toolchain 3aedcf06b73fc36feeebca3d579e1d2a6c40acc5 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate diffuse 0.1.1 [INFO] finished tweaking crates.io crate diffuse 0.1.1 [INFO] tweaked toml for crates.io crate diffuse 0.1.1 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] crate crates.io crate diffuse 0.1.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 46ce015b47102482b6ce1c605b5b1934b53ccb91f2e2ba1438af86226d83a687 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "46ce015b47102482b6ce1c605b5b1934b53ccb91f2e2ba1438af86226d83a687", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "46ce015b47102482b6ce1c605b5b1934b53ccb91f2e2ba1438af86226d83a687", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "46ce015b47102482b6ce1c605b5b1934b53ccb91f2e2ba1438af86226d83a687", kill_on_drop: false }` [INFO] [stdout] 46ce015b47102482b6ce1c605b5b1934b53ccb91f2e2ba1438af86226d83a687 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1188efe2ba2b929085640f192ea6480be6075fcdc0facfcfbbce2e0a60814df3 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "1188efe2ba2b929085640f192ea6480be6075fcdc0facfcfbbce2e0a60814df3", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling syn v1.0.48 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling const_fn v0.4.3 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling cc v1.0.62 [INFO] [stderr] Compiling siphasher v0.3.3 [INFO] [stderr] Compiling ucd-trie v0.1.3 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling netcdf-sys v0.3.3 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking adler32 v1.2.0 [INFO] [stderr] Compiling paste v1.0.2 [INFO] [stderr] Checking bytemuck v1.4.1 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Checking hashbrown v0.9.1 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking number_prefix v0.3.0 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking hex v0.4.2 [INFO] [stderr] Checking slice-of-array v0.2.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.8.0 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Compiling phf_shared v0.8.0 [INFO] [stderr] Compiling pest v2.1.3 [INFO] [stderr] Checking miniz_oxide v0.3.7 [INFO] [stderr] Checking rgb v0.8.25 [INFO] [stderr] Compiling generic-array v0.14.4 [INFO] [stderr] Checking byteorder v1.3.4 [INFO] [stderr] Checking typenum v1.12.0 [INFO] [stderr] Checking bitflags v1.2.1 [INFO] [stderr] Checking ryu v1.0.5 [INFO] [stderr] Checking phf v0.8.0 [INFO] [stderr] Checking ansi_rgb v0.2.0 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Checking deflate v0.8.6 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Checking png v0.16.7 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling pest_meta v2.1.3 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking terminal_size v0.1.13 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Checking regex v1.4.2 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.0 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Checking noisy_float v0.1.13 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking console v0.13.0 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking indicatif v0.15.0 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Compiling palette v0.5.0 [INFO] [stderr] Checking rand_distr v0.3.0 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Checking ndarray-parallel v0.9.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-1198107aee20fd2e/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5586d10f1ae0 - std::backtrace_rs::backtrace::libunwind::trace::h4dee703919bfd40a [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x5586d10f1ae0 - std::backtrace_rs::backtrace::trace_unsynchronized::h457e839f1a563e20 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5586d10f1ae0 - std::sys_common::backtrace::_print_fmt::h86a55fb30f8393c8 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x5586d10f1ae0 - ::fmt::h7b3d6cac46d277e1 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x5586d110caff - core::fmt::write::h127419eb46f2ecc9 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/fmt/mod.rs:1094:17 [INFO] [stderr] 5: 0x5586d10eecf5 - std::io::Write::write_fmt::h6010cfbb4726588b [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/io/mod.rs:1578:15 [INFO] [stderr] 6: 0x5586d10f3a7b - std::sys_common::backtrace::_print::h79b4f9652330cc9d [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x5586d10f3a7b - std::sys_common::backtrace::print::h330bb326a76af8cf [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x5586d10f3a7b - std::panicking::default_hook::{{closure}}::heb6a42a7d50a472e [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x5586d10f3543 - std::panicking::default_hook::h17e521ba6d68d6e1 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x5586d10f402d - std::panicking::rust_panic_with_hook::h70db735e3a6e70cb [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x5586d0f08ab3 - std::panicking::begin_panic::{{closure}}::hfc0859212c077845 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x5586d0f11ed9 - std::sys_common::backtrace::__rust_end_short_backtrace::hf5e3659c81dc5ab8 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x5586d0f089e9 - std::panicking::begin_panic::h8b3ebebf1f5df805 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x5586d0ee2f89 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h8fc691f6d84f8a8e [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x5586d0ee47a1 - build_script_build::main::h8617101e0cc2e4e4 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x5586d0eea06b - core::ops::function::FnOnce::call_once::hcdf8a05ac6a9844c [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x5586d0ef101e - std::sys_common::backtrace::__rust_begin_short_backtrace::hdb6cdfd83b374e6e [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x5586d0eee721 - std::rt::lang_start::{{closure}}::h4f33eb6e3f3eb4aa [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x5586d10f442a - core::ops::function::impls:: for &F>::call_once::hbcc915e668c7ca11 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x5586d10f442a - std::panicking::try::do_call::h6b0f430d48122ddf [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x5586d10f442a - std::panicking::try::h6ba420e2e21b5afa [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x5586d10f442a - std::panic::catch_unwind::h8366719d1f615eee [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panic.rs:431:14 [INFO] [stderr] 23: 0x5586d10f442a - std::rt::lang_start_internal::h965c28c9ce06ee73 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x5586d0eee700 - std::rt::lang_start::hcd60fa1d2a19e087 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x5586d0ee5c9c - main [INFO] [stderr] 26: 0x7f0beb67c0b3 - __libc_start_main [INFO] [stderr] 27: 0x5586d0eddece - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "1188efe2ba2b929085640f192ea6480be6075fcdc0facfcfbbce2e0a60814df3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1188efe2ba2b929085640f192ea6480be6075fcdc0facfcfbbce2e0a60814df3", kill_on_drop: false }` [INFO] [stdout] 1188efe2ba2b929085640f192ea6480be6075fcdc0facfcfbbce2e0a60814df3