[INFO] fetching crate d4utils 0.1.17... [INFO] checking d4utils-0.1.17 against master#3aedcf06b73fc36feeebca3d579e1d2a6c40acc5 for pr-65819 [INFO] extracting crate d4utils 0.1.17 into /workspace/builds/worker-14/source [INFO] validating manifest of crates.io crate d4utils 0.1.17 on toolchain 3aedcf06b73fc36feeebca3d579e1d2a6c40acc5 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4utils 0.1.17 [INFO] finished tweaking crates.io crate d4utils 0.1.17 [INFO] tweaked toml for crates.io crate d4utils 0.1.17 written to /workspace/builds/worker-14/source/Cargo.toml [INFO] crate crates.io crate d4utils 0.1.17 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] cd32324ad9c3c5597fcad4c8932cb67113a09197ed8649a9bc31c69d9a92f94e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "cd32324ad9c3c5597fcad4c8932cb67113a09197ed8649a9bc31c69d9a92f94e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "cd32324ad9c3c5597fcad4c8932cb67113a09197ed8649a9bc31c69d9a92f94e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cd32324ad9c3c5597fcad4c8932cb67113a09197ed8649a9bc31c69d9a92f94e", kill_on_drop: false }` [INFO] [stdout] cd32324ad9c3c5597fcad4c8932cb67113a09197ed8649a9bc31c69d9a92f94e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c46a2d1a26fb48b37929c74ca49dd9409f2375a0a3bdb8fe07617f3ffccaa889" "/opt/rustwide/cargo-home/bin/cargo" "+3aedcf06b73fc36feeebca3d579e1d2a6c40acc5" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7a5fca2eed228ede976312e70c245cb3020c234e91a5db91fc7fd029d5be97c4 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7a5fca2eed228ede976312e70c245cb3020c234e91a5db91fc7fd029d5be97c4", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.90 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.6.23 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling serde v1.0.124 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling syn v1.0.64 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Compiling serde_derive v1.0.124 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling clang-sys v1.1.1 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.3 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Checking aho-corasick v0.7.15 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.3 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Checking getrandom v0.1.16 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking flate2 v1.0.20 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking plotters v0.2.15 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling regex v1.4.5 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking d4-framefile v0.1.17 [INFO] [stderr] Compiling d4-hts v0.1.17 [INFO] [stderr] Compiling d4-bigwig v0.1.17 [INFO] [stderr] error: failed to run custom build command for `d4-bigwig v0.1.17` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-bigwig-9ad0cca51a14df66/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + cd /opt/rustwide/target/debug/build/d4-bigwig-e1ab7ef09f10f16d/out [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-bigwig-e1ab7ef09f10f16d/out/libBigWig [INFO] [stderr] + git clone -b 0.4.4 https://github.com/dpryan79/libBigWig [INFO] [stderr] Cloning into 'libBigWig'... [INFO] [stderr] fatal: unable to access 'https://github.com/dpryan79/libBigWig/': Could not resolve host: github.com [INFO] [stderr] + cd libBigWig [INFO] [stderr] build-lib.sh: line 12: cd: libBigWig: No such file or directory [INFO] [stderr] + perl -i -pe s/-lcurl//g Makefile [INFO] [stderr] Can't open Makefile: No such file or directory. [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] ++ grep musl [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + curl https://zlib.net/zlib-1.2.11.tar.gz [INFO] [stderr] + tar xz [INFO] [stderr] % Total % Received % Xferd Average Speed Time Time Time Current [INFO] [stderr] Dload Upload Total Spent Left Speed [INFO] [stderr] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0curl: (6) Could not resolve host: zlib.net [INFO] [stderr] [INFO] [stderr] gzip: stdin: unexpected end of file [INFO] [stderr] tar: Child returned status 1 [INFO] [stderr] tar: Error is not recoverable: exiting now [INFO] [stderr] + cd zlib-1.2.11 [INFO] [stderr] build-lib.sh: line 29: cd: zlib-1.2.11: No such file or directory [INFO] [stderr] + is_musl [INFO] [stderr] ++ grep musl [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + return 1 [INFO] [stderr] + ./configure [INFO] [stderr] build-lib.sh: line 30: ./configure: No such file or directory [INFO] [stderr] + make [INFO] [stderr] make: *** No targets specified and no makefile found. Stop. [INFO] [stderr] + cp libz.a .. [INFO] [stderr] cp: cannot stat 'libz.a': No such file or directory [INFO] [stderr] + cd .. [INFO] [stderr] + CFLAGS='-DNOCURL -O3 -Izlib-1.2.11' [INFO] [stderr] + make -j8 lib-static [INFO] [stderr] make: *** No rule to make target 'lib-static'. Stop. [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build-lib.sh\", lib_root.to_str().unwrap(),\n \"0.4.4\"]).spawn().expect(\"Unable to build libBigWig\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.17/build.rs:25:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x555fedacccc0 - std::backtrace_rs::backtrace::libunwind::trace::h4dee703919bfd40a [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x555fedacccc0 - std::backtrace_rs::backtrace::trace_unsynchronized::h457e839f1a563e20 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x555fedacccc0 - std::sys_common::backtrace::_print_fmt::h86a55fb30f8393c8 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x555fedacccc0 - ::fmt::h7b3d6cac46d277e1 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x555fedaee2cf - core::fmt::write::h127419eb46f2ecc9 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/fmt/mod.rs:1094:17 [INFO] [stderr] 5: 0x555fedac9b55 - std::io::Write::write_fmt::h6010cfbb4726588b [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/io/mod.rs:1578:15 [INFO] [stderr] 6: 0x555fedacef7b - std::sys_common::backtrace::_print::h79b4f9652330cc9d [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x555fedacef7b - std::sys_common::backtrace::print::h330bb326a76af8cf [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x555fedacef7b - std::panicking::default_hook::{{closure}}::heb6a42a7d50a472e [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x555fedacea43 - std::panicking::default_hook::h17e521ba6d68d6e1 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x555fedacf52d - std::panicking::rust_panic_with_hook::h70db735e3a6e70cb [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x555fedacf0f7 - std::panicking::begin_panic_handler::{{closure}}::h777c71c8e5a7e25c [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:495:13 [INFO] [stderr] 12: 0x555fedacd17c - std::sys_common::backtrace::__rust_end_short_backtrace::h3e9bf30168899554 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x555fedacf089 - rust_begin_unwind [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:493:5 [INFO] [stderr] 14: 0x555fed5a38b1 - core::panicking::panic_fmt::h5322a082d19786c3 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x555fed5a37fd - core::panicking::panic::haebb15b6842d6229 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x555fed5a68e3 - build_script_build::main::h860eb18c4e1ec951 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.17/build.rs:25:5 [INFO] [stderr] 17: 0x555fed5a4bdb - core::ops::function::FnOnce::call_once::hacd6a788a7f9008e [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 18: 0x555fed5a4b3e - std::sys_common::backtrace::__rust_begin_short_backtrace::h30ae5e99eda1559a [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 19: 0x555fed5a5321 - std::rt::lang_start::{{closure}}::h2ddd6df5037694e1 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/rt.rs:66:18 [INFO] [stderr] 20: 0x555fedacfa2a - core::ops::function::impls:: for &F>::call_once::hbcc915e668c7ca11 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 21: 0x555fedacfa2a - std::panicking::try::do_call::h6b0f430d48122ddf [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:379:40 [INFO] [stderr] 22: 0x555fedacfa2a - std::panicking::try::h6ba420e2e21b5afa [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panicking.rs:343:19 [INFO] [stderr] 23: 0x555fedacfa2a - std::panic::catch_unwind::h8366719d1f615eee [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/panic.rs:431:14 [INFO] [stderr] 24: 0x555fedacfa2a - std::rt::lang_start_internal::h965c28c9ce06ee73 [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/rt.rs:51:25 [INFO] [stderr] 25: 0x555fed5a5300 - std::rt::lang_start::hfc90a7222a71e56c [INFO] [stderr] at /rustc/3aedcf06b73fc36feeebca3d579e1d2a6c40acc5/library/std/src/rt.rs:65:5 [INFO] [stderr] 26: 0x555fed5a6b9c - main [INFO] [stderr] 27: 0x7f1437cc60b3 - __libc_start_main [INFO] [stderr] 28: 0x555fed5a404e - _start [INFO] [stderr] 29: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "7a5fca2eed228ede976312e70c245cb3020c234e91a5db91fc7fd029d5be97c4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7a5fca2eed228ede976312e70c245cb3020c234e91a5db91fc7fd029d5be97c4", kill_on_drop: false }` [INFO] [stdout] 7a5fca2eed228ede976312e70c245cb3020c234e91a5db91fc7fd029d5be97c4