[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against try#38f08371587f97c145dedb2c055ac7b01bf1e788 for pr-65294 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 38f08371587f97c145dedb2c055ac7b01bf1e788 [INFO] running `"/workspace/cargo-home/bin/cargo" "+38f08371587f97c145dedb2c055ac7b01bf1e788" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+38f08371587f97c145dedb2c055ac7b01bf1e788" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+38f08371587f97c145dedb2c055ac7b01bf1e788" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+38f08371587f97c145dedb2c055ac7b01bf1e788" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 0ce6edb8a5fba1c5fa2ab599444cdaeaea8640ac119f26af8ac12e11c2b6cda6 [INFO] running `"docker" "start" "-a" "0ce6edb8a5fba1c5fa2ab599444cdaeaea8640ac119f26af8ac12e11c2b6cda6"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-ee3b7209c4f20c69/build_script_build-ee3b7209c4f20c69.build_script_build.c9xgehsk-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ee3b7209c4f20c69/build_script_build-ee3b7209c4f20c69.build_script_build.c9xgehsk-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ee3b7209c4f20c69/build_script_build-ee3b7209c4f20c69.build_script_build.c9xgehsk-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ee3b7209c4f20c69/build_script_build-ee3b7209c4f20c69.build_script_build.c9xgehsk-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ee3b7209c4f20c69/build_script_build-ee3b7209c4f20c69.build_script_build.c9xgehsk-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-ee3b7209c4f20c69/build_script_build-ee3b7209c4f20c69" "/opt/rustwide/target/debug/build/libhdf5-sys-ee3b7209c4f20c69/build_script_build-ee3b7209c4f20c69.56lzkh9mrffsd6c5.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-7171e4921fc6b23e.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-bccb14d0b7059c7c.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-92229a954b72eaba.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-47760a38072438b7.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-8df13534c097d2a6.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-2752df717d867083.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-e0c91c2e7bc5e851.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-b902e2012523841f.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-90b2aefc527d5f49.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-2e971fa1f9ae5bc3.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-ab730618ac0bf172.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-3889944de5ebad63.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-ee6cd571f628e382.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-d42ad110293a2a8d.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-35bbe9bd05e3eb08.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-369938d455baac2c/build_script_build-369938d455baac2c.build_script_build.ektezh93-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-369938d455baac2c/build_script_build-369938d455baac2c.build_script_build.ektezh93-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-369938d455baac2c/build_script_build-369938d455baac2c.build_script_build.ektezh93-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-369938d455baac2c/build_script_build-369938d455baac2c.build_script_build.ektezh93-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-369938d455baac2c/build_script_build-369938d455baac2c.build_script_build.ektezh93-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-369938d455baac2c/build_script_build-369938d455baac2c" "/opt/rustwide/target/debug/build/hdf5-rs-369938d455baac2c/build_script_build-369938d455baac2c.2aqglfotbbg0gs3t.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-7171e4921fc6b23e.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-bccb14d0b7059c7c.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-92229a954b72eaba.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-47760a38072438b7.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-8df13534c097d2a6.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-2752df717d867083.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-e0c91c2e7bc5e851.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-b902e2012523841f.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-90b2aefc527d5f49.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-2e971fa1f9ae5bc3.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-ab730618ac0bf172.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-3889944de5ebad63.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-ee6cd571f628e382.rlib" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-d42ad110293a2a8d.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/38f08371587f97c145dedb2c055ac7b01bf1e788/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-35bbe9bd05e3eb08.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "0ce6edb8a5fba1c5fa2ab599444cdaeaea8640ac119f26af8ac12e11c2b6cda6"` [INFO] running `"docker" "rm" "-f" "0ce6edb8a5fba1c5fa2ab599444cdaeaea8640ac119f26af8ac12e11c2b6cda6"` [INFO] [stdout] 0ce6edb8a5fba1c5fa2ab599444cdaeaea8640ac119f26af8ac12e11c2b6cda6