[INFO] crate ncbitaxonomy 0.1.5 is already in cache [INFO] checking ncbitaxonomy-0.1.5 against master#446e5e57b667c841ba3ebb4b41b44fb98bd3af4b for pr-65294 [INFO] extracting crate ncbitaxonomy 0.1.5 into /workspace/builds/worker-12/source [INFO] validating manifest of crates.io crate ncbitaxonomy 0.1.5 on toolchain 446e5e57b667c841ba3ebb4b41b44fb98bd3af4b [INFO] running `"/workspace/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate ncbitaxonomy 0.1.5 [INFO] finished tweaking crates.io crate ncbitaxonomy 0.1.5 [INFO] tweaked toml for crates.io crate ncbitaxonomy 0.1.5 written to /workspace/builds/worker-12/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] 8ffd9ef3f4a3015cf74ceaf3070a75c456f4117813b618f59d44a35a6ac5e70c [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "8ffd9ef3f4a3015cf74ceaf3070a75c456f4117813b618f59d44a35a6ac5e70c"` [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Checking bytecount v0.3.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking statrs v0.9.0 [INFO] [stderr] Checking ndarray v0.12.1 [INFO] [stderr] Checking bstr v0.2.8 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking indextree v3.0.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Checking clap v2.32.0 [INFO] [stderr] Checking csv v1.1.1 [INFO] [stderr] Checking ncbitaxonomy v0.1.5 (/opt/rustwide/workdir) [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/lib.rs:107:17 [INFO] [stderr] | [INFO] [stderr] 107 | let mut fields = line.split("\t|\t").collect::>(); [INFO] [stderr] | ----^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/lib.rs:107:17 [INFO] [stderr] | [INFO] [stderr] 107 | let mut fields = line.split("\t|\t").collect::>(); [INFO] [stderr] | ----^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bin/taxonomy_filter_refseq.rs:74:127 [INFO] [stderr] | [INFO] [stderr] 74 | Some(name) => Box::new(File::create(name).unwrap_or_else(|_| panic!("Failed to open output file ({})", name))) as Box, [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn io::Write` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bin/taxonomy_filter_refseq.rs:75:47 [INFO] [stderr] | [INFO] [stderr] 75 | None => Box::new(io::stdout()) as Box, [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn io::Write` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bin/taxonomy_filter_refseq.rs:74:127 [INFO] [stderr] | [INFO] [stderr] 74 | Some(name) => Box::new(File::create(name).unwrap_or_else(|_| panic!("Failed to open output file ({})", name))) as Box, [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn io::Write` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bin/taxonomy_filter_refseq.rs:75:47 [INFO] [stderr] | [INFO] [stderr] 75 | None => Box::new(io::stdout()) as Box, [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn io::Write` [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 20.19s [INFO] running `"docker" "inspect" "8ffd9ef3f4a3015cf74ceaf3070a75c456f4117813b618f59d44a35a6ac5e70c"` [INFO] running `"docker" "rm" "-f" "8ffd9ef3f4a3015cf74ceaf3070a75c456f4117813b618f59d44a35a6ac5e70c"` [INFO] [stdout] 8ffd9ef3f4a3015cf74ceaf3070a75c456f4117813b618f59d44a35a6ac5e70c