[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against master#446e5e57b667c841ba3ebb4b41b44fb98bd3af4b for pr-65294 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-12/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 446e5e57b667c841ba3ebb4b41b44fb98bd3af4b [INFO] running `"/workspace/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-12/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+446e5e57b667c841ba3ebb4b41b44fb98bd3af4b" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 41fa17219a125125a28f7263f5423241afebc45ef098e9a1336e9cbf038cef93 [INFO] running `"docker" "start" "-a" "41fa17219a125125a28f7263f5423241afebc45ef098e9a1336e9cbf038cef93"` [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-ee10b326c680e604/build_script_build-ee10b326c680e604.build_script_build.70evvp1m-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-ee10b326c680e604/build_script_build-ee10b326c680e604.build_script_build.70evvp1m-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-ee10b326c680e604/build_script_build-ee10b326c680e604.build_script_build.70evvp1m-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-ee10b326c680e604/build_script_build-ee10b326c680e604.build_script_build.70evvp1m-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-ee10b326c680e604/build_script_build-ee10b326c680e604.build_script_build.70evvp1m-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-ee10b326c680e604/build_script_build-ee10b326c680e604" "/opt/rustwide/target/debug/build/hdf5-rs-ee10b326c680e604/build_script_build-ee10b326c680e604.3ohi2w1tps360q00.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-3f210a005fa6eb06.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-58095339d9fa9bb8.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-79cb707cd9e6d6d5.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-ed0f472b2ce07b40.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-c104a5f20f892698.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-199c379f33d64cee.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-4d7a69a017aa5363.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-d9cf7b215361def0.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-840eb7efa955483b.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-9684a3803199263e.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-dd2747a0280ab2fc.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-e6fc0775c89c4930.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-2d16de564348ed71.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-308b9285c370bc64.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-7bddeff8d530f904.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-bbeddfa64a66c269/build_script_build-bbeddfa64a66c269.build_script_build.brcuvogb-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-bbeddfa64a66c269/build_script_build-bbeddfa64a66c269.build_script_build.brcuvogb-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-bbeddfa64a66c269/build_script_build-bbeddfa64a66c269.build_script_build.brcuvogb-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-bbeddfa64a66c269/build_script_build-bbeddfa64a66c269.build_script_build.brcuvogb-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-bbeddfa64a66c269/build_script_build-bbeddfa64a66c269.build_script_build.brcuvogb-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-bbeddfa64a66c269/build_script_build-bbeddfa64a66c269" "/opt/rustwide/target/debug/build/libhdf5-sys-bbeddfa64a66c269/build_script_build-bbeddfa64a66c269.338n9c2slg9eisxg.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-3f210a005fa6eb06.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-58095339d9fa9bb8.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-79cb707cd9e6d6d5.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-ed0f472b2ce07b40.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-c104a5f20f892698.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-199c379f33d64cee.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-4d7a69a017aa5363.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-d9cf7b215361def0.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-840eb7efa955483b.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-9684a3803199263e.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-dd2747a0280ab2fc.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-e6fc0775c89c4930.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-2d16de564348ed71.rlib" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-308b9285c370bc64.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/446e5e57b667c841ba3ebb4b41b44fb98bd3af4b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-7bddeff8d530f904.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "41fa17219a125125a28f7263f5423241afebc45ef098e9a1336e9cbf038cef93"` [INFO] running `"docker" "rm" "-f" "41fa17219a125125a28f7263f5423241afebc45ef098e9a1336e9cbf038cef93"` [INFO] [stdout] 41fa17219a125125a28f7263f5423241afebc45ef098e9a1336e9cbf038cef93