[INFO] updating cached repository https://github.com/slazicoicr/bam_histogram_qc [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/mnt/big/crater/work/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 76f1995e64ae232319aa05d407466f6ce0d927f0 [INFO] checking slazicoicr/bam_histogram_qc against master#9b9d2aff8de4d499b4ba7ca406e000f8d3754ea7 for pr-64564 [INFO] running `"git" "clone" "work/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc" "work/builds/worker-6/source"` [INFO] [stderr] Cloning into 'work/builds/worker-6/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/slazicoicr/bam_histogram_qc on toolchain 9b9d2aff8de4d499b4ba7ca406e000f8d3754ea7-alt [INFO] running `"/mnt/big/crater/work/cargo-home/bin/cargo" "+9b9d2aff8de4d499b4ba7ca406e000f8d3754ea7-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/slazicoicr/bam_histogram_qc [INFO] finished tweaking git repo https://github.com/slazicoicr/bam_histogram_qc [INFO] tweaked toml for git repo https://github.com/slazicoicr/bam_histogram_qc written to work/builds/worker-6/source/Cargo.toml [INFO] crate git repo https://github.com/slazicoicr/bam_histogram_qc already has a lockfile, it will not be regenerated [INFO] running `"/mnt/big/crater/work/cargo-home/bin/cargo" "+9b9d2aff8de4d499b4ba7ca406e000f8d3754ea7-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/mnt/big/crater/work/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/mnt/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+9b9d2aff8de4d499b4ba7ca406e000f8d3754ea7-alt" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] eda16f2d63de6902599b919b28497afcefd8ab5f8193f7418618273d0815154e [INFO] running `"docker" "start" "-a" "eda16f2d63de6902599b919b28497afcefd8ab5f8193f7418618273d0815154e"` [INFO] [stderr] Compiling libc v0.2.55 [INFO] [stderr] Compiling cfg-if v0.1.9 [INFO] [stderr] Compiling rustc-demangle v0.1.14 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling bindgen v0.49.2 [INFO] [stderr] Compiling syn v0.15.34 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling bitflags v1.0.4 [INFO] [stderr] Compiling termcolor v1.0.4 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling serde v1.0.91 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Compiling libloading v0.5.0 [INFO] [stderr] Compiling backtrace v0.3.20 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling regex-syntax v0.6.6 [INFO] [stderr] Compiling log v0.4.6 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Checking itertools v0.8.0 [INFO] [stderr] Compiling memchr v2.2.0 [INFO] [stderr] Compiling byteorder v1.3.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling aho-corasick v0.7.3 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Checking atty v0.2.11 [INFO] [stderr] Checking bzip2-sys v0.1.7 [INFO] [stderr] Compiling backtrace-sys v0.1.28 [INFO] [stderr] Checking clap v2.33.0 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling which v2.0.1 [INFO] [stderr] Compiling regex v1.1.6 [INFO] [stderr] Compiling env_logger v0.6.1 [INFO] [stderr] Checking serde_json v1.0.39 [INFO] [stderr] Compiling serde_derive v1.0.91 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Compiling rust-htslib v0.23.0 [INFO] [stderr] Checking bam_histogram_qc v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/main.rs:85:38 [INFO] [stderr] | [INFO] [stderr] 85 | let cigar_iter: &mut Iterator = if record.is_reverse() { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/main.rs:85:38 [INFO] [stderr] | [INFO] [stderr] 85 | let cigar_iter: &mut Iterator = if record.is_reverse() { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 30s [INFO] running `"docker" "inspect" "eda16f2d63de6902599b919b28497afcefd8ab5f8193f7418618273d0815154e"` [INFO] running `"docker" "rm" "-f" "eda16f2d63de6902599b919b28497afcefd8ab5f8193f7418618273d0815154e"` [INFO] [stdout] eda16f2d63de6902599b919b28497afcefd8ab5f8193f7418618273d0815154e