[INFO] updating cached repository https://github.com/10XGenomics/vartrix
[INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/mnt/big/crater/work/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"`
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] a597657a62b4be43a6d9d069e3b49409957e0d50
[INFO] checking 10XGenomics/vartrix against master#fe6d05a8b32f5c66c427ca524dbcce5a7145f87e for pr-64327
[INFO] running `"git" "clone" "work/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix" "work/builds/worker-5/source"`
[INFO] [stderr] Cloning into 'work/builds/worker-5/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/vartrix on toolchain fe6d05a8b32f5c66c427ca524dbcce5a7145f87e-alt
[INFO] running `"/mnt/big/crater/work/cargo-home/bin/cargo" "+fe6d05a8b32f5c66c427ca524dbcce5a7145f87e-alt" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] finished tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] tweaked toml for git repo https://github.com/10XGenomics/vartrix written to work/builds/worker-5/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/vartrix already has a lockfile, it will not be regenerated
[INFO] running `"/mnt/big/crater/work/cargo-home/bin/cargo" "+fe6d05a8b32f5c66c427ca524dbcce5a7145f87e-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr] error: the lock file /mnt/big/crater/work/builds/worker-5/source/Cargo.lock needs to be updated but --locked was passed to prevent this
[INFO] the lockfile is outdated, regenerating it
[INFO] running `"/mnt/big/crater/work/cargo-home/bin/cargo" "+fe6d05a8b32f5c66c427ca524dbcce5a7145f87e-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"`
[INFO] running `"/mnt/big/crater/work/cargo-home/bin/cargo" "+fe6d05a8b32f5c66c427ca524dbcce5a7145f87e-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/mnt/big/crater/work/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/mnt/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+fe6d05a8b32f5c66c427ca524dbcce5a7145f87e-alt" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stdout] 3838456383cf7d572402146fb4f99037a89700636a11194947676acf8daa6289
[INFO] running `"docker" "start" "-a" "3838456383cf7d572402146fb4f99037a89700636a11194947676acf8daa6289"`
[INFO] [stderr]    Compiling syn v1.0.5
[INFO] [stderr]    Compiling bindgen v0.51.1
[INFO] [stderr]    Compiling doc-comment v0.3.1
[INFO] [stderr]    Compiling ndarray v0.13.0
[INFO] [stderr]    Compiling bio v0.29.0
[INFO] [stderr]     Checking strum v0.16.0
[INFO] [stderr]     Checking bytecount v0.6.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.7
[INFO] [stderr]    Compiling clang-sys v0.28.1
[INFO] [stderr]    Compiling num-complex v0.2.3
[INFO] [stderr]    Compiling lzma-sys v0.1.15
[INFO] [stderr]    Compiling bv v0.11.0
[INFO] [stderr]     Checking itertools v0.7.11
[INFO] [stderr]     Checking itertools v0.6.5
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]    Compiling atty v0.2.13
[INFO] [stderr]    Compiling which v3.0.0
[INFO] [stderr]     Checking terminal_size v0.1.8
[INFO] [stderr]    Compiling rustc-hash v1.0.1
[INFO] [stderr]     Checking term v0.5.2
[INFO] [stderr]     Checking ordered-float v1.0.2
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking regex v1.3.1
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]     Checking chrono v0.4.9
[INFO] [stderr]     Checking alga v0.5.4
[INFO] [stderr]     Checking statrs v0.11.0
[INFO] [stderr]    Compiling aho-corasick v0.7.6
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]     Checking ndarray v0.12.1
[INFO] [stderr]     Checking simplelog v0.5.3
[INFO] [stderr]     Checking os_type v2.2.0
[INFO] [stderr]    Compiling cexpr v0.3.5
[INFO] [stderr]    Compiling env_logger v0.6.2
[INFO] [stderr]     Checking snafu v0.5.0
[INFO] [stderr]    Compiling serde_derive v1.0.101
[INFO] [stderr]    Compiling strum_macros v0.16.0
[INFO] [stderr]    Compiling serde v1.0.101
[INFO] [stderr]     Checking bstr v0.2.8
[INFO] [stderr]     Checking toml v0.4.10
[INFO] [stderr]     Checking vec_map v0.8.1
[INFO] [stderr]     Checking bio-types v0.5.1
[INFO] [stderr]     Checking multimap v0.6.0
[INFO] [stderr]     Checking sprs v0.6.5
[INFO] [stderr]     Checking docopt v1.1.0
[INFO] [stderr]     Checking clap v2.33.0
[INFO] [stderr]     Checking csv v1.1.1
[INFO] [stderr]     Checking human-panic v1.0.1
[INFO] [stderr]    Compiling rust-htslib v0.26.0
[INFO] [stderr]     Checking vartrix v1.1.7 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 4m 36s
[INFO] running `"docker" "inspect" "3838456383cf7d572402146fb4f99037a89700636a11194947676acf8daa6289"`
[INFO] running `"docker" "rm" "-f" "3838456383cf7d572402146fb4f99037a89700636a11194947676acf8daa6289"`
[INFO] [stdout] 3838456383cf7d572402146fb4f99037a89700636a11194947676acf8daa6289