[INFO] updating cached repository Giels/symon [INFO] running `"git" "fetch" "--all"` [INFO] [stdout] Fetching origin [INFO] [stderr] From git://github.com/Giels/symon [INFO] [stderr] * branch HEAD -> FETCH_HEAD [INFO] running `"git" "clone" "work/cache/sources/gh/Giels/symon" "work/ex/pr-63247/sources/master#452087b4bf18cece2d52d7cd8c9147195e5404bf/gh/Giels/symon"` [INFO] [stderr] Cloning into 'work/ex/pr-63247/sources/master#452087b4bf18cece2d52d7cd8c9147195e5404bf/gh/Giels/symon'... [INFO] [stderr] done. [INFO] running `"git" "clone" "work/cache/sources/gh/Giels/symon" "work/ex/pr-63247/sources/try#757dacae0a9f1b46b3ab58a1f1232332e8fc7dab/gh/Giels/symon"` [INFO] [stderr] Cloning into 'work/ex/pr-63247/sources/try#757dacae0a9f1b46b3ab58a1f1232332e8fc7dab/gh/Giels/symon'... [INFO] [stderr] done. [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 14d7f301104a793aa8ab798816b03346589f3861 [INFO] sha for GitHub repo Giels/symon: 14d7f301104a793aa8ab798816b03346589f3861 [INFO] validating manifest of Giels/symon on toolchain master#452087b4bf18cece2d52d7cd8c9147195e5404bf [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+452087b4bf18cece2d52d7cd8c9147195e5404bf-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of Giels/symon on toolchain try#757dacae0a9f1b46b3ab58a1f1232332e8fc7dab [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+757dacae0a9f1b46b3ab58a1f1232332e8fc7dab-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing Giels/symon [INFO] finished frobbing Giels/symon [INFO] frobbed toml for Giels/symon written to work/ex/pr-63247/sources/master#452087b4bf18cece2d52d7cd8c9147195e5404bf/gh/Giels/symon/Cargo.toml [INFO] started frobbing Giels/symon [INFO] finished frobbing Giels/symon [INFO] frobbed toml for Giels/symon written to work/ex/pr-63247/sources/try#757dacae0a9f1b46b3ab58a1f1232332e8fc7dab/gh/Giels/symon/Cargo.toml [INFO] crate Giels/symon already has a lockfile, it will not be regenerated [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+452087b4bf18cece2d52d7cd8c9147195e5404bf-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+757dacae0a9f1b46b3ab58a1f1232332e8fc7dab-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] checking Giels/symon against master#452087b4bf18cece2d52d7cd8c9147195e5404bf for pr-63247 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-63247/worker-6/master#452087b4bf18cece2d52d7cd8c9147195e5404bf:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-63247/sources/master#452087b4bf18cece2d52d7cd8c9147195e5404bf/gh/Giels/symon:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+452087b4bf18cece2d52d7cd8c9147195e5404bf-alt" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] 3f5e214758a7b65c4b6d3cc8c01d6342c452256c133b7e5596fbe53ff6b2ae97 [INFO] running `"docker" "start" "-a" "3f5e214758a7b65c4b6d3cc8c01d6342c452256c133b7e5596fbe53ff6b2ae97"` [INFO] [stderr] Compiling libc v0.2.20 [INFO] [stderr] Compiling rustc-serialize v0.3.22 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking rand v0.3.15 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Checking num-bigint v0.1.35 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/crater/target/debug/build/libhdf5-sys-bf79db542a5f937e/build_script_build-bf79db542a5f937e.build_script_build.8lfmjmw8-cgu.0.rcgu.o" "/opt/crater/target/debug/build/libhdf5-sys-bf79db542a5f937e/build_script_build-bf79db542a5f937e.build_script_build.8lfmjmw8-cgu.1.rcgu.o" "/opt/crater/target/debug/build/libhdf5-sys-bf79db542a5f937e/build_script_build-bf79db542a5f937e.build_script_build.8lfmjmw8-cgu.2.rcgu.o" "/opt/crater/target/debug/build/libhdf5-sys-bf79db542a5f937e/build_script_build-bf79db542a5f937e.build_script_build.8lfmjmw8-cgu.3.rcgu.o" "/opt/crater/target/debug/build/libhdf5-sys-bf79db542a5f937e/build_script_build-bf79db542a5f937e.build_script_build.8lfmjmw8-cgu.4.rcgu.o" "-o" "/opt/crater/target/debug/build/libhdf5-sys-bf79db542a5f937e/build_script_build-bf79db542a5f937e" "/opt/crater/target/debug/build/libhdf5-sys-bf79db542a5f937e/build_script_build-bf79db542a5f937e.1waeix9q162bjfuk.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/crater/target/debug/deps" "-L" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/crater/target/debug/deps/liblibhdf5_lib-bab8499fab284fbf.rlib" "-Wl,--start-group" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-7548652b9c39abd3.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-ec628cd240e4bc67.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-56ad64fb5328899a.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-a3a72a706a841e97.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-d447f5ed37785ce6.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-cfb0b5984b56b145.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-0a811d017e103df4.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-509ae7ea5d169efa.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-daaa2f6016adf99b.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-8e8f90941839bbaa.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-dd0113b22cd91cca.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-76a83decd17e1d4e.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-cbc03b754633f11b.rlib" "-Wl,--end-group" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-8e98dbeba017b31f.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: Could not compile `libhdf5-sys`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/crater/target/debug/build/hdf5-rs-e7413b8066acd3a6/build_script_build-e7413b8066acd3a6.build_script_build.6y02j4m4-cgu.0.rcgu.o" "/opt/crater/target/debug/build/hdf5-rs-e7413b8066acd3a6/build_script_build-e7413b8066acd3a6.build_script_build.6y02j4m4-cgu.1.rcgu.o" "/opt/crater/target/debug/build/hdf5-rs-e7413b8066acd3a6/build_script_build-e7413b8066acd3a6.build_script_build.6y02j4m4-cgu.2.rcgu.o" "/opt/crater/target/debug/build/hdf5-rs-e7413b8066acd3a6/build_script_build-e7413b8066acd3a6.build_script_build.6y02j4m4-cgu.3.rcgu.o" "/opt/crater/target/debug/build/hdf5-rs-e7413b8066acd3a6/build_script_build-e7413b8066acd3a6.build_script_build.6y02j4m4-cgu.4.rcgu.o" "-o" "/opt/crater/target/debug/build/hdf5-rs-e7413b8066acd3a6/build_script_build-e7413b8066acd3a6" "/opt/crater/target/debug/build/hdf5-rs-e7413b8066acd3a6/build_script_build-e7413b8066acd3a6.4omgeal2a8bcxohu.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/crater/target/debug/deps" "-L" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/crater/target/debug/deps/liblibhdf5_lib-bab8499fab284fbf.rlib" "-Wl,--start-group" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-7548652b9c39abd3.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-ec628cd240e4bc67.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-56ad64fb5328899a.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-a3a72a706a841e97.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-d447f5ed37785ce6.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-cfb0b5984b56b145.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-0a811d017e103df4.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-509ae7ea5d169efa.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-daaa2f6016adf99b.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-8e8f90941839bbaa.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-dd0113b22cd91cca.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-76a83decd17e1d4e.rlib" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-cbc03b754633f11b.rlib" "-Wl,--end-group" "/opt/crater/rustup-home/toolchains/452087b4bf18cece2d52d7cd8c9147195e5404bf-alt/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-8e98dbeba017b31f.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: Could not compile `hdf5-rs`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "3f5e214758a7b65c4b6d3cc8c01d6342c452256c133b7e5596fbe53ff6b2ae97"` [INFO] running `"docker" "rm" "-f" "3f5e214758a7b65c4b6d3cc8c01d6342c452256c133b7e5596fbe53ff6b2ae97"` [INFO] [stdout] 3f5e214758a7b65c4b6d3cc8c01d6342c452256c133b7e5596fbe53ff6b2ae97