[INFO] crate hdf5 0.5.2 is already in cache [INFO] extracting crate hdf5 0.5.2 into work/ex/pr-62849/sources/master#435236b8877cdb98c82eaebfb7887782277265c5/reg/hdf5/0.5.2 [INFO] extracting crate hdf5 0.5.2 into work/ex/pr-62849/sources/try#b5c7f157c20453dde8d47371abe73b32351b4e7f/reg/hdf5/0.5.2 [INFO] validating manifest of hdf5-0.5.2 on toolchain master#435236b8877cdb98c82eaebfb7887782277265c5 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+435236b8877cdb98c82eaebfb7887782277265c5-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of hdf5-0.5.2 on toolchain try#b5c7f157c20453dde8d47371abe73b32351b4e7f [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing hdf5-0.5.2 [INFO] finished frobbing hdf5-0.5.2 [INFO] frobbed toml for hdf5-0.5.2 written to work/ex/pr-62849/sources/master#435236b8877cdb98c82eaebfb7887782277265c5/reg/hdf5/0.5.2/Cargo.toml [INFO] started frobbing hdf5-0.5.2 [INFO] finished frobbing hdf5-0.5.2 [INFO] frobbed toml for hdf5-0.5.2 written to work/ex/pr-62849/sources/try#b5c7f157c20453dde8d47371abe73b32351b4e7f/reg/hdf5/0.5.2/Cargo.toml [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+435236b8877cdb98c82eaebfb7887782277265c5-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+435236b8877cdb98c82eaebfb7887782277265c5-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] checking hdf5-0.5.2 against try#b5c7f157c20453dde8d47371abe73b32351b4e7f for pr-62849 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-62849/worker-6/try#b5c7f157c20453dde8d47371abe73b32351b4e7f:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-62849/sources/try#b5c7f157c20453dde8d47371abe73b32351b4e7f/reg/hdf5/0.5.2:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] b20dce18c088f4d3f55c84573420af180c737f9a6edba69dfa767eea9f6b715e [INFO] running `"docker" "start" "-a" "b20dce18c088f4d3f55c84573420af180c737f9a6edba69dfa767eea9f6b715e"` [INFO] [stderr] Compiling lazy_static v1.3.0 [INFO] [stderr] Compiling regex-syntax v0.6.11 [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking scopeguard v1.0.0 [INFO] [stderr] Compiling proc-macro-hack-impl v0.4.2 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking either v1.5.2 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Compiling error-chain v0.12.1 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Checking lock_api v0.2.0 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Compiling libc v0.2.60 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Checking rand_isaac v0.1.1 [INFO] [stderr] Checking rand_hc v0.1.0 [INFO] [stderr] Checking rand_xorshift v0.1.1 [INFO] [stderr] Compiling proc-macro-hack v0.4.2 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Checking rand_chacha v0.1.1 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling mashup-impl v0.1.9 [INFO] [stderr] Checking rand v0.6.5 [INFO] [stderr] Checking rand_pcg v0.2.0 [INFO] [stderr] Checking hdf5-types v0.5.2 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Checking rand v0.7.0 [INFO] [stderr] Checking tempdir v0.3.7 [INFO] [stderr] Checking mashup v0.1.9 [INFO] [stderr] Compiling regex v1.2.1 [INFO] [stderr] Compiling hdf5-sys v0.5.2 [INFO] [stderr] Compiling hdf5-derive v0.5.2 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.5.2` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/crater/target/debug/build/hdf5-sys-d1472f7ed34ff4a5/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/crater/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.5.2/build.rs:528:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55ef1c25967b - backtrace::backtrace::libunwind::trace::h80786597adfabf72 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.34/src/backtrace/libunwind.rs:88 [INFO] [stderr] 1: 0x55ef1c25967b - backtrace::backtrace::trace_unsynchronized::hcac650387ca20819 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.34/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55ef1c25967b - std::sys_common::backtrace::_print::h1b9354ff68cb5a2b [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:47 [INFO] [stderr] 3: 0x55ef1c25967b - std::sys_common::backtrace::print::hee32569be499cf66 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:36 [INFO] [stderr] 4: 0x55ef1c25967b - std::panicking::default_hook::{{closure}}::h57d4a5a18212e6c4 [INFO] [stderr] at src/libstd/panicking.rs:200 [INFO] [stderr] 5: 0x55ef1c259356 - std::panicking::default_hook::h6b5ac8e0c8ee81de [INFO] [stderr] at src/libstd/panicking.rs:214 [INFO] [stderr] 6: 0x55ef1c259d8d - std::panicking::rust_panic_with_hook::h087293a0d0382d86 [INFO] [stderr] at src/libstd/panicking.rs:477 [INFO] [stderr] 7: 0x55ef1c23edd5 - std::panicking::begin_panic::hba83cfc0f1976341 [INFO] [stderr] at /rustc/b5c7f157c20453dde8d47371abe73b32351b4e7f/src/libstd/panicking.rs:411 [INFO] [stderr] 8: 0x55ef1bfbfdd9 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h84c572777989c517 [INFO] [stderr] at /opt/crater/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.5.2/build.rs:528 [INFO] [stderr] 9: 0x55ef1bfc120c - build_script_build::main::hef0b25a4efc114e3 [INFO] [stderr] at /opt/crater/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.5.2/build.rs:606 [INFO] [stderr] 10: 0x55ef1bfc4740 - std::rt::lang_start::{{closure}}::h1b211cd5a43804f5 [INFO] [stderr] at /rustc/b5c7f157c20453dde8d47371abe73b32351b4e7f/src/libstd/rt.rs:64 [INFO] [stderr] 11: 0x55ef1c259793 - std::rt::lang_start_internal::{{closure}}::h1a060554ddace6f7 [INFO] [stderr] at src/libstd/rt.rs:49 [INFO] [stderr] 12: 0x55ef1c259793 - std::panicking::try::do_call::h36cfd8d9c1d0d936 [INFO] [stderr] at src/libstd/panicking.rs:296 [INFO] [stderr] 13: 0x55ef1c26063a - __rust_maybe_catch_panic [INFO] [stderr] at src/libpanic_unwind/lib.rs:80 [INFO] [stderr] 14: 0x55ef1c25a29d - std::panicking::try::h225224763b892cde [INFO] [stderr] at src/libstd/panicking.rs:275 [INFO] [stderr] 15: 0x55ef1c25a29d - std::panic::catch_unwind::h3043ed737cbd6e8e [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 16: 0x55ef1c25a29d - std::rt::lang_start_internal::h97b8d999a39debed [INFO] [stderr] at src/libstd/rt.rs:48 [INFO] [stderr] 17: 0x55ef1bfc4719 - std::rt::lang_start::hd2c52e11a0d20be2 [INFO] [stderr] at /rustc/b5c7f157c20453dde8d47371abe73b32351b4e7f/src/libstd/rt.rs:64 [INFO] [stderr] 18: 0x55ef1bfc1d3a - main [INFO] [stderr] 19: 0x7f5591b342e1 - __libc_start_main [INFO] [stderr] 20: 0x55ef1bfbb36a - _start [INFO] [stderr] 21: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "b20dce18c088f4d3f55c84573420af180c737f9a6edba69dfa767eea9f6b715e"` [INFO] running `"docker" "rm" "-f" "b20dce18c088f4d3f55c84573420af180c737f9a6edba69dfa767eea9f6b715e"` [INFO] [stdout] b20dce18c088f4d3f55c84573420af180c737f9a6edba69dfa767eea9f6b715e