[INFO] updating cached repository wheaton5/het_snp_kmers [INFO] running `"git" "fetch" "--all"` [INFO] [stdout] Fetching origin [INFO] [stderr] From git://github.com/wheaton5/het_snp_kmers [INFO] [stderr] * branch HEAD -> FETCH_HEAD [INFO] running `"git" "clone" "work/cache/sources/gh/wheaton5/het_snp_kmers" "work/ex/pr-62849/sources/master#435236b8877cdb98c82eaebfb7887782277265c5/gh/wheaton5/het_snp_kmers"` [INFO] [stderr] Cloning into 'work/ex/pr-62849/sources/master#435236b8877cdb98c82eaebfb7887782277265c5/gh/wheaton5/het_snp_kmers'... [INFO] [stderr] done. [INFO] running `"git" "clone" "work/cache/sources/gh/wheaton5/het_snp_kmers" "work/ex/pr-62849/sources/try#b5c7f157c20453dde8d47371abe73b32351b4e7f/gh/wheaton5/het_snp_kmers"` [INFO] [stderr] Cloning into 'work/ex/pr-62849/sources/try#b5c7f157c20453dde8d47371abe73b32351b4e7f/gh/wheaton5/het_snp_kmers'... [INFO] [stderr] done. [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] d6dc5ee320c4e01a4297da4d6c1fe2db8fc40514 [INFO] sha for GitHub repo wheaton5/het_snp_kmers: d6dc5ee320c4e01a4297da4d6c1fe2db8fc40514 [INFO] validating manifest of wheaton5/het_snp_kmers on toolchain master#435236b8877cdb98c82eaebfb7887782277265c5 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+435236b8877cdb98c82eaebfb7887782277265c5-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of wheaton5/het_snp_kmers on toolchain try#b5c7f157c20453dde8d47371abe73b32351b4e7f [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing wheaton5/het_snp_kmers [INFO] finished frobbing wheaton5/het_snp_kmers [INFO] frobbed toml for wheaton5/het_snp_kmers written to work/ex/pr-62849/sources/master#435236b8877cdb98c82eaebfb7887782277265c5/gh/wheaton5/het_snp_kmers/Cargo.toml [INFO] started frobbing wheaton5/het_snp_kmers [INFO] finished frobbing wheaton5/het_snp_kmers [INFO] frobbed toml for wheaton5/het_snp_kmers written to work/ex/pr-62849/sources/try#b5c7f157c20453dde8d47371abe73b32351b4e7f/gh/wheaton5/het_snp_kmers/Cargo.toml [INFO] crate wheaton5/het_snp_kmers already has a lockfile, it will not be regenerated [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+435236b8877cdb98c82eaebfb7887782277265c5-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/wheaton5/dna_io.git` [INFO] [stderr] error: the lock file /mnt/big/crater/work/ex/pr-62849/sources/master#435236b8877cdb98c82eaebfb7887782277265c5/gh/wheaton5/het_snp_kmers/Cargo.lock needs to be updated but --locked was passed to prevent this [INFO] the lockfile is outdated, regenerating it [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+435236b8877cdb98c82eaebfb7887782277265c5-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] [stderr] Updating git repository `https://github.com/10XGenomics/rust-debruijn.git` [INFO] [stderr] Updating git repository `https://github.com/wheaton5/dna_io.git` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] [stderr] Updating git repository `https://github.com/10XGenomics/rust-debruijn.git` [INFO] [stderr] Updating git repository `https://github.com/wheaton5/dna_io.git` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+435236b8877cdb98c82eaebfb7887782277265c5-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] checking wheaton5/het_snp_kmers against try#b5c7f157c20453dde8d47371abe73b32351b4e7f for pr-62849 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-62849/worker-0/try#b5c7f157c20453dde8d47371abe73b32351b4e7f:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-62849/sources/try#b5c7f157c20453dde8d47371abe73b32351b4e7f/gh/wheaton5/het_snp_kmers:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+b5c7f157c20453dde8d47371abe73b32351b4e7f-alt" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] 0cc999ac8f3fd51c8c0215f9c6dacb908f7d0b5f25a092b027e862728af99e18 [INFO] running `"docker" "start" "-a" "0cc999ac8f3fd51c8c0215f9c6dacb908f7d0b5f25a092b027e862728af99e18"` [INFO] [stderr] Compiling rustc-demangle v0.1.15 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling log v0.4.8 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling termcolor v1.0.5 [INFO] [stderr] Compiling bindgen v0.51.0 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking spin v0.4.10 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling textwrap v0.9.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Checking wyhash v0.3.0 [INFO] [stderr] Checking bloom v0.3.2 [INFO] [stderr] Checking concurrent-hashmap v0.2.2 [INFO] [stderr] Compiling byteorder v1.3.2 [INFO] [stderr] Compiling atty v0.2.13 [INFO] [stderr] Compiling backtrace-sys v0.1.31 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling clang-sys v0.28.1 [INFO] [stderr] Checking clap v2.27.1 [INFO] [stderr] Compiling backtrace v0.3.34 [INFO] [stderr] Checking flate2 v1.0.9 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Compiling which v2.0.1 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Checking boomphf v0.5.2 [INFO] [stderr] Checking debruijn v0.3.0 (https://github.com/10XGenomics/rust-debruijn.git#9c7caf19) [INFO] [stderr] Compiling rust-htslib v0.24.0 [INFO] [stderr] Checking dna_io v0.1.0 (https://github.com/wheaton5/dna_io.git#a640f47b) [INFO] [stderr] Checking het_snp_kmers v0.1.0 (/opt/crater/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 29s [INFO] running `"docker" "inspect" "0cc999ac8f3fd51c8c0215f9c6dacb908f7d0b5f25a092b027e862728af99e18"` [INFO] running `"docker" "rm" "-f" "0cc999ac8f3fd51c8c0215f9c6dacb908f7d0b5f25a092b027e862728af99e18"` [INFO] [stdout] 0cc999ac8f3fd51c8c0215f9c6dacb908f7d0b5f25a092b027e862728af99e18