[INFO] cloning repository https://github.com/bihealth/var-agg [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/bihealth/var-agg" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbihealth%2Fvar-agg"` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbihealth%2Fvar-agg'... [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 8b199088fe24970bcd004d5f7c1c9cd174a0e82d [INFO] checking bihealth/var-agg against try#ea663bba38739867a4b75ac820991b4f5d093c3b for pr-62262-1 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbihealth%2Fvar-agg" "/workspace/builds/worker-2/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/bihealth/var-agg on toolchain ea663bba38739867a4b75ac820991b4f5d093c3b [INFO] running `"/workspace/cargo-home/bin/cargo" "+ea663bba38739867a4b75ac820991b4f5d093c3b" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/bihealth/var-agg [INFO] finished tweaking git repo https://github.com/bihealth/var-agg [INFO] tweaked toml for git repo https://github.com/bihealth/var-agg written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate git repo https://github.com/bihealth/var-agg already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+ea663bba38739867a4b75ac820991b4f5d093c3b" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+ea663bba38739867a4b75ac820991b4f5d093c3b" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 9234e63230a2ee10ccc0efc638fc021eae6b6840d4b52f2804af4a24c35fb810 [INFO] running `"docker" "start" "-a" "9234e63230a2ee10ccc0efc638fc021eae6b6840d4b52f2804af4a24c35fb810"` [INFO] [stderr] Compiling serde v1.0.76 [INFO] [stderr] Compiling termcolor v1.0.3 [INFO] [stderr] Compiling bindgen v0.36.1 [INFO] [stderr] Compiling bv v0.7.4 [INFO] [stderr] Checking slog v2.3.3 [INFO] [stderr] Checking ieee754 v0.2.2 [INFO] [stderr] Compiling memchr v2.0.2 [INFO] [stderr] Compiling clang-sys v0.22.0 [INFO] [stderr] Compiling libloading v0.5.0 [INFO] [stderr] Compiling fs-utils v1.1.0 [INFO] [stderr] Checking isatty v0.1.8 [INFO] [stderr] Checking csv-core v0.1.4 [INFO] [stderr] Checking num-complex v0.1.43 [INFO] [stderr] Checking itertools-num v0.1.2 [INFO] [stderr] Checking statrs v0.9.0 [INFO] [stderr] Compiling syn v0.14.9 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Checking chrono v0.4.6 [INFO] [stderr] Checking regex v0.2.11 [INFO] [stderr] Checking error-chain v0.12.0 [INFO] [stderr] Compiling aho-corasick v0.6.8 [INFO] [stderr] Checking slog-async v2.3.0 [INFO] [stderr] Checking ndarray v0.9.1 [INFO] [stderr] Compiling regex v1.0.4 [INFO] [stderr] Checking slog-term v2.4.0 [INFO] [stderr] Compiling env_logger v0.5.13 [INFO] [stderr] Compiling serde_derive v1.0.76 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking bio-types v0.2.0 [INFO] [stderr] Checking csv v1.0.1 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking clap v2.32.0 [INFO] [stderr] Checking bio v0.22.0 [INFO] [stderr] Compiling rust-htslib v0.21.0 [INFO] [stderr] Checking var-agg v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] warning: the item `rust_htslib` is imported redundantly [INFO] [stderr] --> src/bcf_utils.rs:14:13 [INFO] [stderr] | [INFO] [stderr] 4 | use rust_htslib; [INFO] [stderr] | ----------- the item `rust_htslib` is already imported here [INFO] [stderr] ... [INFO] [stderr] 14 | use rust_htslib; [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: the item `ffi` is imported redundantly [INFO] [stderr] --> src/bcf_utils.rs:15:13 [INFO] [stderr] | [INFO] [stderr] 5 | use std::ffi; [INFO] [stderr] | -------- the item `ffi` is already imported here [INFO] [stderr] ... [INFO] [stderr] 15 | use std::ffi; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: the item `rust_htslib` is imported redundantly [INFO] [stderr] --> src/bcf_utils.rs:14:13 [INFO] [stderr] | [INFO] [stderr] 4 | use rust_htslib; [INFO] [stderr] | ----------- the item `rust_htslib` is already imported here [INFO] [stderr] ... [INFO] [stderr] 14 | use rust_htslib; [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: the item `ffi` is imported redundantly [INFO] [stderr] --> src/bcf_utils.rs:15:13 [INFO] [stderr] | [INFO] [stderr] 5 | use std::ffi; [INFO] [stderr] | -------- the item `ffi` is already imported here [INFO] [stderr] ... [INFO] [stderr] 15 | use std::ffi; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 17s [INFO] running `"docker" "inspect" "9234e63230a2ee10ccc0efc638fc021eae6b6840d4b52f2804af4a24c35fb810"` [INFO] running `"docker" "rm" "-f" "9234e63230a2ee10ccc0efc638fc021eae6b6840d4b52f2804af4a24c35fb810"` [INFO] [stdout] 9234e63230a2ee10ccc0efc638fc021eae6b6840d4b52f2804af4a24c35fb810