[INFO] fetching crate needletail 0.2.2... [INFO] checking needletail-0.2.2 against master#2748a9fd93dd1a00a4521f4f16de5befbf77f6cd for pr-62262-1 [INFO] extracting crate needletail 0.2.2 into /workspace/builds/worker-12/source [INFO] validating manifest of crates.io crate needletail 0.2.2 on toolchain 2748a9fd93dd1a00a4521f4f16de5befbf77f6cd [INFO] running `"/workspace/cargo-home/bin/cargo" "+2748a9fd93dd1a00a4521f4f16de5befbf77f6cd" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate needletail 0.2.2 [INFO] finished tweaking crates.io crate needletail 0.2.2 [INFO] tweaked toml for crates.io crate needletail 0.2.2 written to /workspace/builds/worker-12/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+2748a9fd93dd1a00a4521f4f16de5befbf77f6cd" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+2748a9fd93dd1a00a4521f4f16de5befbf77f6cd" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+2748a9fd93dd1a00a4521f4f16de5befbf77f6cd" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] a26e12d29cacff51c1897138bfebe31549049cc84d2f0d82d6ccb21ef9acbbcc [INFO] running `"docker" "start" "-a" "a26e12d29cacff51c1897138bfebe31549049cc84d2f0d82d6ccb21ef9acbbcc"` [INFO] [stderr] Checking needletail v0.2.2 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/fastx.rs:299:59 [INFO] [stderr] | [INFO] [stderr] 299 | fastx_reader(&mut cursor, None, callback, None::<&mut FnMut(&'static str) -> ()>) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn FnMut(&'static str) -> ()` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:8:19 [INFO] [stderr] | [INFO] [stderr] 8 | file: &'a mut io::Read, [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:23:30 [INFO] [stderr] | [INFO] [stderr] 23 | pub fn new(file: &'a mut io::Read, buf_size: usize, header: &[u8]) -> Result, ParseError> { [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/util.rs:34:32 [INFO] [stderr] | [INFO] [stderr] 34 | fn cause(&self) -> Option<&error::Error> { [INFO] [stderr] | ^^^^^^^^^^^^ help: use `dyn`: `dyn error::Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/fastx.rs:299:59 [INFO] [stderr] | [INFO] [stderr] 299 | fastx_reader(&mut cursor, None, callback, None::<&mut FnMut(&'static str) -> ()>) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn FnMut(&'static str) -> ()` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:8:19 [INFO] [stderr] | [INFO] [stderr] 8 | file: &'a mut io::Read, [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:23:30 [INFO] [stderr] | [INFO] [stderr] 23 | pub fn new(file: &'a mut io::Read, buf_size: usize, header: &[u8]) -> Result, ParseError> { [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/util.rs:34:32 [INFO] [stderr] | [INFO] [stderr] 34 | fn cause(&self) -> Option<&error::Error> { [INFO] [stderr] | ^^^^^^^^^^^^ help: use `dyn`: `dyn error::Error` [INFO] [stderr] [INFO] [stderr] warning: method is never used: `from_bytes` [INFO] [stderr] --> src/buffer.rs:85:5 [INFO] [stderr] | [INFO] [stderr] 85 | pub fn from_bytes(data: &'a [u8]) -> Self { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `s` [INFO] [stderr] --> src/fastx.rs:698:13 [INFO] [stderr] | [INFO] [stderr] 698 | for s in rec_buffer.by_ref() { [INFO] [stderr] | ^ help: consider prefixing with an underscore: `_s` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused imports: `bitkmer`, `kmer` [INFO] [stderr] --> benches/benchmark.rs:7:25 [INFO] [stderr] | [INFO] [stderr] 7 | use needletail::{fastx, kmer, bitkmer}; [INFO] [stderr] | ^^^^ ^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `kmer` [INFO] [stderr] --> benches/benchmark.rs:21:21 [INFO] [stderr] | [INFO] [stderr] 21 | for (_, kmer, was_rc) in seq.normalize(true).kmers(ksize, true) { [INFO] [stderr] | ^^^^ help: consider prefixing with an underscore: `_kmer` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `k` [INFO] [stderr] --> benches/benchmark.rs:41:21 [INFO] [stderr] | [INFO] [stderr] 41 | for (_, k, was_rc) in seq.bit_kmers(ksize, true) { [INFO] [stderr] | ^ help: consider prefixing with an underscore: `_k` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `ksize` [INFO] [stderr] --> benches/benchmark.rs:58:9 [INFO] [stderr] | [INFO] [stderr] 58 | let ksize = 31; [INFO] [stderr] | ^^^^^ help: consider prefixing with an underscore: `_ksize` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `ksize` [INFO] [stderr] --> benches/benchmark.rs:75:9 [INFO] [stderr] | [INFO] [stderr] 75 | let ksize = 31; [INFO] [stderr] | ^^^^^ help: consider prefixing with an underscore: `_ksize` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `ksize` [INFO] [stderr] --> benches/benchmark.rs:90:9 [INFO] [stderr] | [INFO] [stderr] 90 | let ksize = 31; [INFO] [stderr] | ^^^^^ help: consider prefixing with an underscore: `_ksize` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `ksize` [INFO] [stderr] --> benches/benchmark.rs:107:9 [INFO] [stderr] | [INFO] [stderr] 107 | let ksize = 31; [INFO] [stderr] | ^^^^^ help: consider prefixing with an underscore: `_ksize` [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> benches/benchmark.rs:62:5 [INFO] [stderr] | [INFO] [stderr] 62 | f.read_to_end(&mut data); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> benches/benchmark.rs:94:5 [INFO] [stderr] | [INFO] [stderr] 94 | f.read_to_end(&mut data); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.38s [INFO] running `"docker" "inspect" "a26e12d29cacff51c1897138bfebe31549049cc84d2f0d82d6ccb21ef9acbbcc"` [INFO] running `"docker" "rm" "-f" "a26e12d29cacff51c1897138bfebe31549049cc84d2f0d82d6ccb21ef9acbbcc"` [INFO] [stdout] a26e12d29cacff51c1897138bfebe31549049cc84d2f0d82d6ccb21ef9acbbcc