[INFO] fetching crate gb-io 0.5.0... [INFO] extracting crate gb-io 0.5.0 into work/ex/pr-62008/sources/master#848e0a23f34aaab3e4a974b031c86ef2a4e4fcc1/reg/gb-io/0.5.0 [INFO] extracting crate gb-io 0.5.0 into work/ex/pr-62008/sources/try#8f81d0bf6baf07b92f1246696722485c4ca0b049/reg/gb-io/0.5.0 [INFO] validating manifest of gb-io-0.5.0 on toolchain master#848e0a23f34aaab3e4a974b031c86ef2a4e4fcc1 [INFO] running `"/mnt/big/ec2-user/crater/work/local/cargo-home/bin/cargo" "+848e0a23f34aaab3e4a974b031c86ef2a4e4fcc1-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of gb-io-0.5.0 on toolchain try#8f81d0bf6baf07b92f1246696722485c4ca0b049 [INFO] running `"/mnt/big/ec2-user/crater/work/local/cargo-home/bin/cargo" "+8f81d0bf6baf07b92f1246696722485c4ca0b049-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing gb-io-0.5.0 [INFO] finished frobbing gb-io-0.5.0 [INFO] frobbed toml for gb-io-0.5.0 written to work/ex/pr-62008/sources/master#848e0a23f34aaab3e4a974b031c86ef2a4e4fcc1/reg/gb-io/0.5.0/Cargo.toml [INFO] started frobbing gb-io-0.5.0 [INFO] finished frobbing gb-io-0.5.0 [INFO] frobbed toml for gb-io-0.5.0 written to work/ex/pr-62008/sources/try#8f81d0bf6baf07b92f1246696722485c4ca0b049/reg/gb-io/0.5.0/Cargo.toml [INFO] running `"/mnt/big/ec2-user/crater/work/local/cargo-home/bin/cargo" "+848e0a23f34aaab3e4a974b031c86ef2a4e4fcc1-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/mnt/big/ec2-user/crater/work/local/cargo-home/bin/cargo" "+8f81d0bf6baf07b92f1246696722485c4ca0b049-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/ec2-user/crater/work/local/cargo-home/bin/cargo" "+848e0a23f34aaab3e4a974b031c86ef2a4e4fcc1-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/mnt/big/ec2-user/crater/work/local/cargo-home/bin/cargo" "+8f81d0bf6baf07b92f1246696722485c4ca0b049-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] checking gb-io-0.5.0 against try#8f81d0bf6baf07b92f1246696722485c4ca0b049 for pr-62008 [INFO] running `"docker" "create" "-v" "/mnt/big/ec2-user/crater/work/local/target-dirs/pr-62008/worker-2/try#8f81d0bf6baf07b92f1246696722485c4ca0b049:/opt/crater/target:rw,Z" "-v" "/mnt/big/ec2-user/crater/work/ex/pr-62008/sources/try#8f81d0bf6baf07b92f1246696722485c4ca0b049/reg/gb-io/0.5.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/ec2-user/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/ec2-user/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+8f81d0bf6baf07b92f1246696722485c4ca0b049-alt" "check" "--frozen" "--all" "--all-targets"` [INFO] [stdout] 4df02faeda74af200d0a560e4aff0c91c83005d140d0913fd2a1bc32a39f5a63 [INFO] running `"docker" "start" "-a" "4df02faeda74af200d0a560e4aff0c91c83005d140d0913fd2a1bc32a39f5a63"` [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking statrs v0.9.0 [INFO] [stderr] Checking bstr v0.2.2 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Compiling gb-io v0.5.0 (/opt/crater/workdir) [INFO] [stderr] Checking string_cache v0.7.3 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Checking csv v1.1.1 [INFO] [stderr] error: couldn't read src/../tests/mg1655.gb: No such file or directory (os error 2) [INFO] [stderr] --> src/lib.rs:72:21 [INFO] [stderr] | [INFO] [stderr] 72 | let ecoli = include_bytes!("../tests/mg1655.gb"); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] error: couldn't read src/../tests/circ.gb: No such file or directory (os error 2) [INFO] [stderr] --> src/lib.rs:88:32 [INFO] [stderr] | [INFO] [stderr] 88 | let circ = parse_slice(include_bytes!("../tests/circ.gb")).unwrap(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] error: couldn't read src/../tests/circ.gb: No such file or directory (os error 2) [INFO] [stderr] --> src/lib.rs:95:32 [INFO] [stderr] | [INFO] [stderr] 95 | let circ = parse_slice(include_bytes!("../tests/circ.gb")).unwrap().pop().unwrap(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] error: couldn't read src/../tests/biopython_tests/ls_orchid.gb: No such file or directory (os error 2) [INFO] [stderr] --> src/lib.rs:114:25 [INFO] [stderr] | [INFO] [stderr] 114 | parse_slice(include_bytes!("../tests/biopython_tests/ls_orchid.gb")).unwrap(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::delimited macros>:6:50 [INFO] [stderr] | [INFO] [stderr] 2 | $ i : expr , $ submac : ident ! ( $ ( $ args : tt ) * ) , $ ( $ rest : tt ) + [INFO] [stderr] | - expected repetition [INFO] [stderr] ... [INFO] [stderr] 6 | $ i , ( ) , $ submac ! ( $ ( $ args ) * ) , $ ( $ rest ) * ) { [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] | [INFO] [stderr] = note: #[deny(meta_variable_misuse)] on by default [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::delimited macros>:9:42 [INFO] [stderr] | [INFO] [stderr] 8 | } } } ) ; ( $ i : expr , $ f : expr , $ ( $ rest : tt ) + ) => ( [INFO] [stderr] | - expected repetition [INFO] [stderr] 9 | delimited ! ( $ i , call ! ( $ f ) , $ ( $ rest ) * ) ; ) ; [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::separated_pair macros>:6:50 [INFO] [stderr] | [INFO] [stderr] 2 | $ i : expr , $ submac : ident ! ( $ ( $ args : tt ) * ) , $ ( $ rest : tt ) + [INFO] [stderr] | - expected repetition [INFO] [stderr] ... [INFO] [stderr] 6 | $ i , ( ) , $ submac ! ( $ ( $ args ) * ) , $ ( $ rest ) * ) { [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::separated_pair macros>:10:47 [INFO] [stderr] | [INFO] [stderr] 9 | $ i : expr , $ f : expr , $ ( $ rest : tt ) + ) => ( [INFO] [stderr] | - expected repetition [INFO] [stderr] 10 | separated_pair ! ( $ i , call ! ( $ f ) , $ ( $ rest ) * ) ; ) ; [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::branch::alt_complete macros>:25:38 [INFO] [stderr] | [INFO] [stderr] 18 | $ ( $ rest : tt ) + ) => ( [INFO] [stderr] | - expected repetition [INFO] [stderr] ... [INFO] [stderr] 25 | let out = alt_complete ! ( $ i , $ ( $ rest ) * ) ; if let ( [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/seq.rs:141:28 [INFO] [stderr] | [INFO] [stderr] 141 | External(Location, Box), [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/seq.rs:743:42 [INFO] [stderr] | [INFO] [stderr] 743 | F: (FnMut(&str) -> Result>) + 'a, [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/seq.rs:755:42 [INFO] [stderr] | [INFO] [stderr] 755 | F: (FnMut(&str) -> Result>) + 'a, [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/reader/nom_parsers.rs:841:35 [INFO] [stderr] | [INFO] [stderr] 841 | pub type NomParser = &'static (Fn(&[u8]) -> IResult<&[u8], T> + 'static); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Fn(&[u8]) -> IResult<&[u8], T> + 'static` [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::delimited macros>:6:50 [INFO] [stderr] | [INFO] [stderr] 2 | $ i : expr , $ submac : ident ! ( $ ( $ args : tt ) * ) , $ ( $ rest : tt ) + [INFO] [stderr] | - expected repetition [INFO] [stderr] ... [INFO] [stderr] 6 | $ i , ( ) , $ submac ! ( $ ( $ args ) * ) , $ ( $ rest ) * ) { [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] | [INFO] [stderr] = note: #[deny(meta_variable_misuse)] on by default [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::delimited macros>:9:42 [INFO] [stderr] | [INFO] [stderr] 8 | } } } ) ; ( $ i : expr , $ f : expr , $ ( $ rest : tt ) + ) => ( [INFO] [stderr] | - expected repetition [INFO] [stderr] 9 | delimited ! ( $ i , call ! ( $ f ) , $ ( $ rest ) * ) ; ) ; [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::separated_pair macros>:6:50 [INFO] [stderr] | [INFO] [stderr] 2 | $ i : expr , $ submac : ident ! ( $ ( $ args : tt ) * ) , $ ( $ rest : tt ) + [INFO] [stderr] | - expected repetition [INFO] [stderr] ... [INFO] [stderr] 6 | $ i , ( ) , $ submac ! ( $ ( $ args ) * ) , $ ( $ rest ) * ) { [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::sequence::separated_pair macros>:10:47 [INFO] [stderr] | [INFO] [stderr] 9 | $ i : expr , $ f : expr , $ ( $ rest : tt ) + ) => ( [INFO] [stderr] | - expected repetition [INFO] [stderr] 10 | separated_pair ! ( $ i , call ! ( $ f ) , $ ( $ rest ) * ) ; ) ; [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] error: meta-variable repeats with different Kleene operator [INFO] [stderr] --> <::nom::branch::alt_complete macros>:25:38 [INFO] [stderr] | [INFO] [stderr] 18 | $ ( $ rest : tt ) + ) => ( [INFO] [stderr] | - expected repetition [INFO] [stderr] ... [INFO] [stderr] 25 | let out = alt_complete ! ( $ i , $ ( $ rest ) * ) ; if let ( [INFO] [stderr] | ^^^^^^ - conflicting repetition [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/seq.rs:141:28 [INFO] [stderr] | [INFO] [stderr] 141 | External(Location, Box), [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/seq.rs:743:42 [INFO] [stderr] | [INFO] [stderr] 743 | F: (FnMut(&str) -> Result>) + 'a, [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/seq.rs:755:42 [INFO] [stderr] | [INFO] [stderr] 755 | F: (FnMut(&str) -> Result>) + 'a, [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/reader/nom_parsers.rs:841:35 [INFO] [stderr] | [INFO] [stderr] 841 | pub type NomParser = &'static (Fn(&[u8]) -> IResult<&[u8], T> + 'static); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Fn(&[u8]) -> IResult<&[u8], T> + 'static` [INFO] [stderr] [INFO] [stderr] error: aborting due to 5 previous errors [INFO] [stderr] [INFO] [stderr] error: Could not compile `gb-io`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: aborting due to 9 previous errors [INFO] [stderr] [INFO] [stderr] error: Could not compile `gb-io`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "4df02faeda74af200d0a560e4aff0c91c83005d140d0913fd2a1bc32a39f5a63"` [INFO] running `"docker" "rm" "-f" "4df02faeda74af200d0a560e4aff0c91c83005d140d0913fd2a1bc32a39f5a63"` [INFO] [stdout] 4df02faeda74af200d0a560e4aff0c91c83005d140d0913fd2a1bc32a39f5a63