[INFO] updating cached repository wheaton5/het_snp_kmers
[INFO] running `"git" "fetch" "--all"`
[INFO] [stdout] Fetching origin
[INFO] [stderr] From git://github.com/wheaton5/het_snp_kmers
[INFO] [stderr]  * branch            HEAD       -> FETCH_HEAD
[INFO] running `"git" "clone" "work/cache/sources/gh/wheaton5/het_snp_kmers" "work/ex/pr-61753/sources/master#8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be/gh/wheaton5/het_snp_kmers"`
[INFO] [stderr] Cloning into 'work/ex/pr-61753/sources/master#8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be/gh/wheaton5/het_snp_kmers'...
[INFO] [stderr] done.
[INFO] running `"git" "clone" "work/cache/sources/gh/wheaton5/het_snp_kmers" "work/ex/pr-61753/sources/try#af22dfc7f56a5057c6b6120a65c74e7b6c1530af/gh/wheaton5/het_snp_kmers"`
[INFO] [stderr] Cloning into 'work/ex/pr-61753/sources/try#af22dfc7f56a5057c6b6120a65c74e7b6c1530af/gh/wheaton5/het_snp_kmers'...
[INFO] [stderr] done.
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] d6dc5ee320c4e01a4297da4d6c1fe2db8fc40514
[INFO] sha for GitHub repo wheaton5/het_snp_kmers: d6dc5ee320c4e01a4297da4d6c1fe2db8fc40514
[INFO] validating manifest of wheaton5/het_snp_kmers on toolchain master#8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be-alt" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] validating manifest of wheaton5/het_snp_kmers on toolchain try#af22dfc7f56a5057c6b6120a65c74e7b6c1530af
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+af22dfc7f56a5057c6b6120a65c74e7b6c1530af-alt" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started frobbing wheaton5/het_snp_kmers
[INFO] finished frobbing wheaton5/het_snp_kmers
[INFO] frobbed toml for wheaton5/het_snp_kmers written to work/ex/pr-61753/sources/master#8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be/gh/wheaton5/het_snp_kmers/Cargo.toml
[INFO] started frobbing wheaton5/het_snp_kmers
[INFO] finished frobbing wheaton5/het_snp_kmers
[INFO] frobbed toml for wheaton5/het_snp_kmers written to work/ex/pr-61753/sources/try#af22dfc7f56a5057c6b6120a65c74e7b6c1530af/gh/wheaton5/het_snp_kmers/Cargo.toml
[INFO] crate wheaton5/het_snp_kmers already has a lockfile, it will not be regenerated
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/wheaton5/dna_io.git`
[INFO] [stderr] error: the lock file /mnt/big/crater/work/ex/pr-61753/sources/master#8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be/gh/wheaton5/het_snp_kmers/Cargo.lock needs to be updated but --locked was passed to prevent this
[INFO] the lockfile is outdated, regenerating it
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"`
[INFO] [stderr]     Blocking waiting for file lock on package cache lock
[INFO] [stderr]     Updating git repository `https://github.com/10XGenomics/rust-debruijn.git`
[INFO] [stderr]     Updating git repository `https://github.com/wheaton5/dna_io.git`
[INFO] [stderr]     Updating git repository `https://github.com/10XGenomics/rust-boomphf`
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+af22dfc7f56a5057c6b6120a65c74e7b6c1530af-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"`
[INFO] [stderr]     Blocking waiting for file lock on package cache lock
[INFO] [stderr]     Updating git repository `https://github.com/10XGenomics/rust-debruijn.git`
[INFO] [stderr]     Updating git repository `https://github.com/wheaton5/dna_io.git`
[INFO] [stderr]     Updating git repository `https://github.com/10XGenomics/rust-boomphf`
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+8e948df707ea8a3c88c65bf2ffdcb2f1cf5491be-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr]     Blocking waiting for file lock on package cache lock
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+af22dfc7f56a5057c6b6120a65c74e7b6c1530af-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr]     Blocking waiting for file lock on package cache lock
[INFO] checking wheaton5/het_snp_kmers against try#af22dfc7f56a5057c6b6120a65c74e7b6c1530af for pr-61753
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-61753/worker-0/try#af22dfc7f56a5057c6b6120a65c74e7b6c1530af:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-61753/sources/try#af22dfc7f56a5057c6b6120a65c74e7b6c1530af/gh/wheaton5/het_snp_kmers:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+af22dfc7f56a5057c6b6120a65c74e7b6c1530af-alt" "check" "--frozen" "--all" "--all-targets"`
[INFO] [stdout] 01d9149f4668e5e15917cbadca4fe550eb11b055faf58527bd325e2f51569cd5
[INFO] running `"docker" "start" "-a" "01d9149f4668e5e15917cbadca4fe550eb11b055faf58527bd325e2f51569cd5"`
[INFO] [stderr]    Compiling rustc-demangle v0.1.15
[INFO] [stderr]    Compiling glob v0.2.11
[INFO] [stderr]    Compiling lazy_static v1.3.0
[INFO] [stderr]    Compiling unicode-width v0.1.5
[INFO] [stderr]    Compiling syn v0.15.35
[INFO] [stderr]    Compiling utf8-ranges v1.0.3
[INFO] [stderr]    Compiling termcolor v1.0.5
[INFO] [stderr]    Compiling strsim v0.6.0
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling yaml-rust v0.3.5
[INFO] [stderr]    Compiling ansi_term v0.9.0
[INFO] [stderr]    Compiling bindgen v0.49.2
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling serde v1.0.92
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking spin v0.4.10
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling libloading v0.5.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.7
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]    Compiling regex-syntax v0.6.7
[INFO] [stderr]    Compiling log v0.4.6
[INFO] [stderr]    Compiling num-iter v0.1.39
[INFO] [stderr]    Compiling fs-utils v1.1.1
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling textwrap v0.9.0
[INFO] [stderr]    Compiling lzma-sys v0.1.14
[INFO] [stderr]     Checking unicode-normalization v0.1.8
[INFO] [stderr]     Checking bloom v0.3.2
[INFO] [stderr]     Checking concurrent-hashmap v0.2.2
[INFO] [stderr]    Compiling memchr v2.2.0
[INFO] [stderr]    Compiling clang-sys v0.28.0
[INFO] [stderr]    Compiling byteorder v1.3.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling backtrace-sys v0.1.28
[INFO] [stderr]    Compiling atty v0.2.11
[INFO] [stderr]     Checking rand v0.5.6
[INFO] [stderr]     Checking libz-sys v1.0.25
[INFO] [stderr]    Compiling aho-corasick v0.7.3
[INFO] [stderr]    Compiling backtrace v0.3.30
[INFO] [stderr]     Checking clap v2.27.1
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]     Checking regex v1.1.7
[INFO] [stderr]     Checking num-complex v0.2.3
[INFO] [stderr]    Compiling failure v0.1.5
[INFO] [stderr]     Checking num-bigint v0.2.2
[INFO] [stderr]     Checking crossbeam v0.7.1
[INFO] [stderr]    Compiling cexpr v0.3.5
[INFO] [stderr]    Compiling which v2.0.1
[INFO] [stderr]     Checking idna v0.1.5
[INFO] [stderr]     Checking num-rational v0.2.2
[INFO] [stderr]     Checking num v0.2.0
[INFO] [stderr]     Checking url v1.7.2
[INFO] [stderr]    Compiling serde_derive v1.0.92
[INFO] [stderr]    Compiling env_logger v0.6.1
[INFO] [stderr]     Checking bio-types v0.5.1
[INFO] [stderr]     Checking serde_json v1.0.39
[INFO] [stderr]     Checking boomphf v0.4.0 (https://github.com/10XGenomics/rust-boomphf#5335194a)
[INFO] [stderr]     Checking debruijn v0.2.1 (https://github.com/10XGenomics/rust-debruijn.git#9eb5d283)
[INFO] [stderr]    Compiling rust-htslib v0.24.0
[INFO] [stderr]     Checking dna_io v0.1.0 (https://github.com/wheaton5/dna_io.git#a640f47b)
[INFO] [stderr]     Checking het_snp_kmers v0.1.0 (/opt/crater/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3m 34s
[INFO] running `"docker" "inspect" "01d9149f4668e5e15917cbadca4fe550eb11b055faf58527bd325e2f51569cd5"`
[INFO] running `"docker" "rm" "-f" "01d9149f4668e5e15917cbadca4fe550eb11b055faf58527bd325e2f51569cd5"`
[INFO] [stdout] 01d9149f4668e5e15917cbadca4fe550eb11b055faf58527bd325e2f51569cd5