[INFO] fetching crate global-supertrees 0.1.0... [INFO] extracting crate global-supertrees 0.1.0 into work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/reg/global-supertrees/0.1.0 [INFO] extracting crate global-supertrees 0.1.0 into work/ex/pr-61629/sources/try#e212b7d492c96d3837691ba29d32d5f468933fb8/reg/global-supertrees/0.1.0 [INFO] validating manifest of global-supertrees-0.1.0 on toolchain master#c8865d8e195813ade6b84434ac9f8850e7112d1a [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of global-supertrees-0.1.0 on toolchain try#e212b7d492c96d3837691ba29d32d5f468933fb8 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+e212b7d492c96d3837691ba29d32d5f468933fb8-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing global-supertrees-0.1.0 [INFO] finished frobbing global-supertrees-0.1.0 [INFO] frobbed toml for global-supertrees-0.1.0 written to work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/reg/global-supertrees/0.1.0/Cargo.toml [INFO] started frobbing global-supertrees-0.1.0 [INFO] finished frobbing global-supertrees-0.1.0 [INFO] frobbed toml for global-supertrees-0.1.0 written to work/ex/pr-61629/sources/try#e212b7d492c96d3837691ba29d32d5f468933fb8/reg/global-supertrees/0.1.0/Cargo.toml [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+e212b7d492c96d3837691ba29d32d5f468933fb8-alt" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+e212b7d492c96d3837691ba29d32d5f468933fb8-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] testing global-supertrees-0.1.0 against master#c8865d8e195813ade6b84434ac9f8850e7112d1a for pr-61629 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-61629/worker-6/master#c8865d8e195813ade6b84434ac9f8850e7112d1a:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/reg/global-supertrees/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "build" "--frozen"` [INFO] [stdout] d5f4f972d7a799c963dd600c09ed6591263afe72206a0b0d31c9c13fc756bf97 [INFO] running `"docker" "start" "-a" "d5f4f972d7a799c963dd600c09ed6591263afe72206a0b0d31c9c13fc756bf97"` [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(bare_trait_objects)] on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_imports)] on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: consider prefixing with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_variables)] on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: consider prefixing with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:1 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(dead_code)] on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 7.58s [INFO] running `"docker" "inspect" "d5f4f972d7a799c963dd600c09ed6591263afe72206a0b0d31c9c13fc756bf97"` [INFO] running `"docker" "rm" "-f" "d5f4f972d7a799c963dd600c09ed6591263afe72206a0b0d31c9c13fc756bf97"` [INFO] [stdout] d5f4f972d7a799c963dd600c09ed6591263afe72206a0b0d31c9c13fc756bf97 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-61629/worker-6/master#c8865d8e195813ade6b84434ac9f8850e7112d1a:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/reg/global-supertrees/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "test" "--frozen" "--no-run"` [INFO] [stdout] 2ff8a0e892cee5f0b446d8b73752137dd693c232ef17bd5630afe87d2a580dee [INFO] running `"docker" "start" "-a" "2ff8a0e892cee5f0b446d8b73752137dd693c232ef17bd5630afe87d2a580dee"` [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(bare_trait_objects)] on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_imports)] on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: consider prefixing with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_variables)] on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: consider prefixing with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:1 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(dead_code)] on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 5.71s [INFO] running `"docker" "inspect" "2ff8a0e892cee5f0b446d8b73752137dd693c232ef17bd5630afe87d2a580dee"` [INFO] running `"docker" "rm" "-f" "2ff8a0e892cee5f0b446d8b73752137dd693c232ef17bd5630afe87d2a580dee"` [INFO] [stdout] 2ff8a0e892cee5f0b446d8b73752137dd693c232ef17bd5630afe87d2a580dee [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-61629/worker-6/master#c8865d8e195813ade6b84434ac9f8850e7112d1a:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/reg/global-supertrees/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "test" "--frozen"` [INFO] [stdout] 9b61f845e75265d8cb8f0f37b3fa24ed2e72233559fbc21bea39b75eb5498c26 [INFO] running `"docker" "start" "-a" "9b61f845e75265d8cb8f0f37b3fa24ed2e72233559fbc21bea39b75eb5498c26"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running /opt/crater/target/debug/deps/global_supertrees-aa9fd3e47f950c6d [INFO] [stdout] [INFO] [stdout] running 16 tests [INFO] [stdout] test tests::tests::test_find_first_zero ... ok [INFO] [stdout] test tests::tests::test_find_first_common_ancestor ... ok [INFO] [stdout] test tests::tests::test_get_levels_from_root ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_1 ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_2 ... ok [INFO] [stdout] test tests::tests::test_load_tree_file ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_3 ... ok [INFO] [stdout] test tests::tests::test_to_dot ... ok [INFO] [stdout] test tests::tests::test_batch_id_tax_mapping ... FAILED [INFO] [stdout] test tests::tests::test_merge_organisms ... FAILED [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium_nested ... ok [INFO] [stdout] test tests::tests::test_get_partial_tree ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_simple ... ok [INFO] [stdout] test tests::tests::test_tree_merging ... ok [INFO] [stdout] test tests::tests::test_neighbour_joining ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_batch_id_tax_mapping stdout ---- [INFO] [stdout] thread 'tests::tests::test_batch_id_tax_mapping' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/libcore/result.rs:999:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56406359103b - backtrace::backtrace::libunwind::trace::hcbf63b8d794b15f4 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.29/src/backtrace/libunwind.rs:88 [INFO] [stdout] 1: 0x56406359103b - backtrace::backtrace::trace_unsynchronized::h681e1cb201a9972d [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.29/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x56406359103b - std::sys_common::backtrace::_print::hd27175ce39811176 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:47 [INFO] [stdout] 3: 0x56406359103b - std::sys_common::backtrace::print::h117e2eebf9a1e122 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:36 [INFO] [stdout] 4: 0x56406359103b - std::panicking::default_hook::{{closure}}::h6369b988ee675335 [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 5: 0x564063590ccf - std::panicking::default_hook::hfaefd2bea4c25f9e [INFO] [stdout] at src/libstd/panicking.rs:209 [INFO] [stdout] 6: 0x5640635917b0 - std::panicking::rust_panic_with_hook::h02c52718165ccced [INFO] [stdout] at src/libstd/panicking.rs:475 [INFO] [stdout] 7: 0x564063591332 - std::panicking::continue_panic_fmt::h9e135674c1df51b4 [INFO] [stdout] at src/libstd/panicking.rs:382 [INFO] [stdout] 8: 0x564063591216 - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:309 [INFO] [stdout] 9: 0x5640635ac03d - core::panicking::panic_fmt::h58c956553ac8538f [INFO] [stdout] at src/libcore/panicking.rs:85 [INFO] [stdout] 10: 0x5640632e4593 - core::result::unwrap_failed::hf33a1cf767a1a79f [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/macros.rs:18 [INFO] [stdout] 11: 0x5640632e7340 - core::result::Result::expect::h3348766306d8c1bb [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/result.rs:827 [INFO] [stdout] 12: 0x5640632fae7d - global_supertrees::uniprot::load_mapping_file::h01302b8b5ae7e060 [INFO] [stdout] at src/uniprot.rs:34 [INFO] [stdout] 13: 0x564063240f1a - global_supertrees::tests::tests::test_batch_id_tax_mapping::h9b65855ad2f878d5 [INFO] [stdout] at src/tests.rs:230 [INFO] [stdout] 14: 0x564063240dda - global_supertrees::tests::tests::test_batch_id_tax_mapping::{{closure}}::hf7e364acf6de51d0 [INFO] [stdout] at src/tests.rs:227 [INFO] [stdout] 15: 0x5640632c92ce - core::ops::function::FnOnce::call_once::h94d0333563582232 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/ops/function.rs:231 [INFO] [stdout] 16: 0x564063313a9f - as core::ops::function::FnOnce>::call_once::h051e7835d417eabd [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/liballoc/boxed.rs:746 [INFO] [stdout] 17: 0x56406359478a - __rust_maybe_catch_panic [INFO] [stdout] at src/libpanic_unwind/lib.rs:85 [INFO] [stdout] 18: 0x56406332e478 - std::panicking::try::h2a4c737ee7913c25 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panicking.rs:273 [INFO] [stdout] 19: 0x56406332e478 - std::panic::catch_unwind::hb4a850da3c0f461d [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panic.rs:388 [INFO] [stdout] 20: 0x56406332e478 - test::run_test::run_test_inner::{{closure}}::hf1081f8a70de250d [INFO] [stdout] at src/libtest/lib.rs:1466 [INFO] [stdout] 21: 0x564063309015 - std::sys_common::backtrace::__rust_begin_short_backtrace::h342b596609fb99e3 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/sys_common/backtrace.rs:77 [INFO] [stdout] 22: 0x56406330cfa5 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h513520560543c60c [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/thread/mod.rs:470 [INFO] [stdout] 23: 0x56406330cfa5 - as core::ops::function::FnOnce<()>>::call_once::ha4e1c61c6177bb54 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panic.rs:309 [INFO] [stdout] 24: 0x56406330cfa5 - std::panicking::try::do_call::h0eb4a0e045c14646 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panicking.rs:294 [INFO] [stdout] 25: 0x56406359478a - __rust_maybe_catch_panic [INFO] [stdout] at src/libpanic_unwind/lib.rs:85 [INFO] [stdout] 26: 0x56406330d5c2 - std::panicking::try::h20774757cea1a66c [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panicking.rs:273 [INFO] [stdout] 27: 0x56406330d5c2 - std::panic::catch_unwind::h38e40a373c8b5452 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panic.rs:388 [INFO] [stdout] 28: 0x56406330d5c2 - std::thread::Builder::spawn_unchecked::{{closure}}::h9bfd91224a2fd035 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/thread/mod.rs:469 [INFO] [stdout] 29: 0x56406330d5c2 - core::ops::function::FnOnce::call_once{{vtable.shim}}::ha2d3b3105bb1d7d1 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/ops/function.rs:231 [INFO] [stdout] 30: 0x564063586eff - as core::ops::function::FnOnce>::call_once::hc6099fbe1f2e9038 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/liballoc/boxed.rs:746 [INFO] [stdout] 31: 0x564063593bb0 - as core::ops::function::FnOnce>::call_once::h1b61db05dcd8ce54 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/liballoc/boxed.rs:746 [INFO] [stdout] 32: 0x564063593bb0 - std::sys_common::thread::start_thread::hd3ed9053e9fea488 [INFO] [stdout] at src/libstd/sys_common/thread.rs:13 [INFO] [stdout] 33: 0x564063593bb0 - std::sys::unix::thread::Thread::new::thread_start::hc17e4e4c7ed2fc8f [INFO] [stdout] at src/libstd/sys/unix/thread.rs:79 [INFO] [stdout] 34: 0x7fa315fc84a4 - start_thread [INFO] [stdout] 35: 0x7fa315af3d0f - __clone [INFO] [stdout] 36: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_merge_organisms stdout ---- [INFO] [stdout] thread 'tests::tests::test_merge_organisms' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/libcore/result.rs:999:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56406359103b - backtrace::backtrace::libunwind::trace::hcbf63b8d794b15f4 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.29/src/backtrace/libunwind.rs:88 [INFO] [stdout] 1: 0x56406359103b - backtrace::backtrace::trace_unsynchronized::h681e1cb201a9972d [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.29/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x56406359103b - std::sys_common::backtrace::_print::hd27175ce39811176 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:47 [INFO] [stdout] 3: 0x56406359103b - std::sys_common::backtrace::print::h117e2eebf9a1e122 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:36 [INFO] [stdout] 4: 0x56406359103b - std::panicking::default_hook::{{closure}}::h6369b988ee675335 [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 5: 0x564063590ccf - std::panicking::default_hook::hfaefd2bea4c25f9e [INFO] [stdout] at src/libstd/panicking.rs:209 [INFO] [stdout] 6: 0x5640635917b0 - std::panicking::rust_panic_with_hook::h02c52718165ccced [INFO] [stdout] at src/libstd/panicking.rs:475 [INFO] [stdout] 7: 0x564063591332 - std::panicking::continue_panic_fmt::h9e135674c1df51b4 [INFO] [stdout] at src/libstd/panicking.rs:382 [INFO] [stdout] 8: 0x564063591216 - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:309 [INFO] [stdout] 9: 0x5640635ac03d - core::panicking::panic_fmt::h58c956553ac8538f [INFO] [stdout] at src/libcore/panicking.rs:85 [INFO] [stdout] 10: 0x5640632e4593 - core::result::unwrap_failed::hf33a1cf767a1a79f [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/macros.rs:18 [INFO] [stdout] 11: 0x5640632e7340 - core::result::Result::expect::h3348766306d8c1bb [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/result.rs:827 [INFO] [stdout] 12: 0x5640632fae7d - global_supertrees::uniprot::load_mapping_file::h01302b8b5ae7e060 [INFO] [stdout] at src/uniprot.rs:34 [INFO] [stdout] 13: 0x5640632411ae - global_supertrees::tests::tests::test_merge_organisms::h1022ac4b8876c61b [INFO] [stdout] at src/tests.rs:237 [INFO] [stdout] 14: 0x56406324114a - global_supertrees::tests::tests::test_merge_organisms::{{closure}}::hc19c7b0ee233dc13 [INFO] [stdout] at src/tests.rs:235 [INFO] [stdout] 15: 0x5640632c909e - core::ops::function::FnOnce::call_once::h15581e6684680352 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/ops/function.rs:231 [INFO] [stdout] 16: 0x564063313a9f - as core::ops::function::FnOnce>::call_once::h051e7835d417eabd [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/liballoc/boxed.rs:746 [INFO] [stdout] 17: 0x56406359478a - __rust_maybe_catch_panic [INFO] [stdout] at src/libpanic_unwind/lib.rs:85 [INFO] [stdout] 18: 0x56406332e478 - std::panicking::try::h2a4c737ee7913c25 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panicking.rs:273 [INFO] [stdout] 19: 0x56406332e478 - std::panic::catch_unwind::hb4a850da3c0f461d [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panic.rs:388 [INFO] [stdout] 20: 0x56406332e478 - test::run_test::run_test_inner::{{closure}}::hf1081f8a70de250d [INFO] [stdout] at src/libtest/lib.rs:1466 [INFO] [stdout] 21: 0x564063309015 - std::sys_common::backtrace::__rust_begin_short_backtrace::h342b596609fb99e3 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/sys_common/backtrace.rs:77 [INFO] [stdout] 22: 0x56406330cfa5 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h513520560543c60c [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/thread/mod.rs:470 [INFO] [stdout] 23: 0x56406330cfa5 - as core::ops::function::FnOnce<()>>::call_once::ha4e1c61c6177bb54 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panic.rs:309 [INFO] [stdout] 24: 0x56406330cfa5 - std::panicking::try::do_call::h0eb4a0e045c14646 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panicking.rs:294 [INFO] [stdout] 25: 0x56406359478a - __rust_maybe_catch_panic [INFO] [stdout] at src/libpanic_unwind/lib.rs:85 [INFO] [stdout] 26: 0x56406330d5c2 - std::panicking::try::h20774757cea1a66c [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panicking.rs:273 [INFO] [stdout] 27: 0x56406330d5c2 - std::panic::catch_unwind::h38e40a373c8b5452 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/panic.rs:388 [INFO] [stdout] 28: 0x56406330d5c2 - std::thread::Builder::spawn_unchecked::{{closure}}::h9bfd91224a2fd035 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libstd/thread/mod.rs:469 [INFO] [stdout] 29: 0x56406330d5c2 - core::ops::function::FnOnce::call_once{{vtable.shim}}::ha2d3b3105bb1d7d1 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/libcore/ops/function.rs:231 [INFO] [stdout] 30: 0x564063586eff - as core::ops::function::FnOnce>::call_once::hc6099fbe1f2e9038 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/liballoc/boxed.rs:746 [INFO] [stdout] 31: 0x564063593bb0 - as core::ops::function::FnOnce>::call_once::h1b61db05dcd8ce54 [INFO] [stdout] at /rustc/c8865d8e195813ade6b84434ac9f8850e7112d1a/src/liballoc/boxed.rs:746 [INFO] [stdout] 32: 0x564063593bb0 - std::sys_common::thread::start_thread::hd3ed9053e9fea488 [INFO] [stdout] at src/libstd/sys_common/thread.rs:13 [INFO] [stdout] 33: 0x564063593bb0 - std::sys::unix::thread::Thread::new::thread_start::hc17e4e4c7ed2fc8f [INFO] [stdout] at src/libstd/sys/unix/thread.rs:79 [INFO] [stdout] 34: 0x7fa315fc84a4 - start_thread [INFO] [stdout] 35: 0x7fa315af3d0f - __clone [INFO] [stdout] 36: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::tests::test_batch_id_tax_mapping [INFO] [stdout] tests::tests::test_merge_organisms [INFO] [stdout] [INFO] [stdout] test result: FAILED. 14 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin global-supertrees' [INFO] running `"docker" "inspect" "9b61f845e75265d8cb8f0f37b3fa24ed2e72233559fbc21bea39b75eb5498c26"` [INFO] running `"docker" "rm" "-f" "9b61f845e75265d8cb8f0f37b3fa24ed2e72233559fbc21bea39b75eb5498c26"` [INFO] [stdout] 9b61f845e75265d8cb8f0f37b3fa24ed2e72233559fbc21bea39b75eb5498c26