[INFO] cloning repository zaeleus/noodles [INFO] running `"git" "clone" "--bare" "git://github.com/zaeleus/noodles.git" "work/cache/sources/gh/zaeleus/noodles"` [INFO] [stderr] Cloning into bare repository 'work/cache/sources/gh/zaeleus/noodles'... [INFO] running `"git" "clone" "work/cache/sources/gh/zaeleus/noodles" "work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/gh/zaeleus/noodles"` [INFO] [stderr] Cloning into 'work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/gh/zaeleus/noodles'... [INFO] [stderr] done. [INFO] running `"git" "clone" "work/cache/sources/gh/zaeleus/noodles" "work/ex/pr-61629/sources/try#e212b7d492c96d3837691ba29d32d5f468933fb8/gh/zaeleus/noodles"` [INFO] [stderr] Cloning into 'work/ex/pr-61629/sources/try#e212b7d492c96d3837691ba29d32d5f468933fb8/gh/zaeleus/noodles'... [INFO] [stderr] done. [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 29afcb400370b3f2124794a43c119b5a8ee3acd3 [INFO] sha for GitHub repo zaeleus/noodles: 29afcb400370b3f2124794a43c119b5a8ee3acd3 [INFO] validating manifest of zaeleus/noodles on toolchain master#c8865d8e195813ade6b84434ac9f8850e7112d1a [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of zaeleus/noodles on toolchain try#e212b7d492c96d3837691ba29d32d5f468933fb8 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+e212b7d492c96d3837691ba29d32d5f468933fb8-alt" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing zaeleus/noodles [INFO] finished frobbing zaeleus/noodles [INFO] frobbed toml for zaeleus/noodles written to work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/gh/zaeleus/noodles/Cargo.toml [INFO] started frobbing zaeleus/noodles [INFO] finished frobbing zaeleus/noodles [INFO] frobbed toml for zaeleus/noodles written to work/ex/pr-61629/sources/try#e212b7d492c96d3837691ba29d32d5f468933fb8/gh/zaeleus/noodles/Cargo.toml [INFO] crate zaeleus/noodles already has a lockfile, it will not be regenerated [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded serde v1.0.81 [INFO] [stderr] Downloaded csv v1.0.2 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+e212b7d492c96d3837691ba29d32d5f468933fb8-alt" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache lock [INFO] testing zaeleus/noodles against master#c8865d8e195813ade6b84434ac9f8850e7112d1a for pr-61629 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-61629/worker-2/master#c8865d8e195813ade6b84434ac9f8850e7112d1a:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/gh/zaeleus/noodles:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "build" "--frozen"` [INFO] [stdout] c32ef77e5a15937c39e11010b1d38b41337718e06b3c81924b743007c02b68af [INFO] running `"docker" "start" "-a" "c32ef77e5a15937c39e11010b1d38b41337718e06b3c81924b743007c02b68af"` [INFO] [stderr] Compiling libc v0.2.44 [INFO] [stderr] Compiling cc v1.0.25 [INFO] [stderr] Compiling serde v1.0.81 [INFO] [stderr] Compiling byteorder v1.2.7 [INFO] [stderr] Compiling memchr v2.1.1 [INFO] [stderr] Compiling miniz-sys v0.1.11 [INFO] [stderr] Compiling csv-core v0.1.4 [INFO] [stderr] Compiling flate2 v1.0.6 [INFO] [stderr] Compiling csv v1.0.2 [INFO] [stderr] Compiling noodles v0.1.0 (/opt/crater/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 27.47s [INFO] running `"docker" "inspect" "c32ef77e5a15937c39e11010b1d38b41337718e06b3c81924b743007c02b68af"` [INFO] running `"docker" "rm" "-f" "c32ef77e5a15937c39e11010b1d38b41337718e06b3c81924b743007c02b68af"` [INFO] [stdout] c32ef77e5a15937c39e11010b1d38b41337718e06b3c81924b743007c02b68af [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-61629/worker-2/master#c8865d8e195813ade6b84434ac9f8850e7112d1a:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/gh/zaeleus/noodles:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "test" "--frozen" "--no-run"` [INFO] [stdout] 8c1e4b2eda1ae3231b50bf43457ac8ff8245ab76c7f0978262da92c157a33ff6 [INFO] running `"docker" "start" "-a" "8c1e4b2eda1ae3231b50bf43457ac8ff8245ab76c7f0978262da92c157a33ff6"` [INFO] [stderr] Compiling noodles v0.1.0 (/opt/crater/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.96s [INFO] running `"docker" "inspect" "8c1e4b2eda1ae3231b50bf43457ac8ff8245ab76c7f0978262da92c157a33ff6"` [INFO] running `"docker" "rm" "-f" "8c1e4b2eda1ae3231b50bf43457ac8ff8245ab76c7f0978262da92c157a33ff6"` [INFO] [stdout] 8c1e4b2eda1ae3231b50bf43457ac8ff8245ab76c7f0978262da92c157a33ff6 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-61629/worker-2/master#c8865d8e195813ade6b84434ac9f8850e7112d1a:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/pr-61629/sources/master#c8865d8e195813ade6b84434ac9f8850e7112d1a/gh/zaeleus/noodles:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+c8865d8e195813ade6b84434ac9f8850e7112d1a-alt" "test" "--frozen"` [INFO] [stdout] a1944621787bcc1f2a31c8b68398616bcca12f355769856781c847e6905031da [INFO] running `"docker" "start" "-a" "a1944621787bcc1f2a31c8b68398616bcca12f355769856781c847e6905031da"` [INFO] [stderr] Blocking waiting for file lock on package cache lock [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 5.45s [INFO] [stderr] Running /opt/crater/target/debug/deps/noodles-b4c7bd7ddd5fa614 [INFO] [stdout] [INFO] [stdout] running 54 tests [INFO] [stdout] test base::tests::test_complement ... ok [INFO] [stdout] test base::tests::test_from_char ... ok [INFO] [stdout] test base::tests::test_description ... ok [INFO] [stdout] test base::tests::test_symbol ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_fmt ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_from_u32 ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_op ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_len ... ok [INFO] [stdout] test formats::bam::cigar::tests::test_from_bytes ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_from_op_for_u32 ... ok [INFO] [stdout] test formats::bam::data::reader::tests::test_read_field ... ok [INFO] [stdout] test formats::bam::flag::tests::test_flags ... ok [INFO] [stdout] test formats::bam::flag::tests::test_empty_flag ... ok [INFO] [stdout] test formats::bam::record::tests::test_bin ... ok [INFO] [stdout] test formats::bam::data::value::tests::test_ty ... ok [INFO] [stdout] test formats::bam::quality::tests::test_chars ... ok [INFO] [stdout] test formats::bam::data::value::tests::test_subtype ... ok [INFO] [stdout] test formats::bam::record::tests::test_block_size ... ok [INFO] [stdout] test formats::bam::record::tests::test_cigar ... ok [INFO] [stdout] test formats::bam::record::tests::test_data ... ok [INFO] [stdout] test formats::bam::record::tests::test_flag ... ok [INFO] [stdout] test formats::bam::record::tests::test_l_read_name ... ok [INFO] [stdout] test formats::bam::record::tests::test_n_cigar_op ... ok [INFO] [stdout] test formats::bam::record::tests::test_next_pos ... ok [INFO] [stdout] test formats::bam::record::tests::test_next_ref_id ... ok [INFO] [stdout] test formats::bam::record::tests::test_pos ... ok [INFO] [stdout] test formats::bam::record::tests::test_mapq ... ok [INFO] [stdout] test formats::bam::record::tests::test_qual ... ok [INFO] [stdout] test formats::bam::record::tests::test_read_name ... ok [INFO] [stdout] test formats::bam::record::tests::test_ref_id ... ok [INFO] [stdout] test formats::bam::record::tests::test_seq ... ok [INFO] [stdout] test formats::bam::record::tests::test_tlen ... ok [INFO] [stdout] test formats::fastq::reader::tests::test_read_line ... ok [INFO] [stdout] test formats::gff::attributes::attributes_iter_tests::test_next ... ok [INFO] [stdout] test formats::gff::record::tests::test_attributes ... ok [INFO] [stdout] test formats::gff::record::tests::test_end ... ok [INFO] [stdout] test formats::gff::record::tests::test_feature ... ok [INFO] [stdout] test formats::gff::attributes::tests::test_trim_quotes ... ok [INFO] [stdout] test formats::gff::record::tests::test_frame ... ok [INFO] [stdout] test formats::gff::record::tests::test_is_empty ... ok [INFO] [stdout] test formats::gff::record::tests::test_source ... ok [INFO] [stdout] test formats::gff::record::tests::test_seq_name ... ok [INFO] [stdout] test formats::gff::record::tests::test_score ... ok [INFO] [stdout] test formats::gff::record::tests::test_start ... ok [INFO] [stdout] test formats::bam::record::tests::test_l_seq ... ok [INFO] [stdout] test formats::fastq::reader::tests::test_read_record ... ok [INFO] [stdout] test formats::bam::sequence::tests::test_complement ... ok [INFO] [stdout] test formats::gff::strand::tests::test_display ... ok [INFO] [stdout] test formats::gff::record::tests::test_validate_empty ... ok [INFO] [stdout] test formats::gff::strand::tests::test_from_str ... ok [INFO] [stdout] test formats::gff::record::tests::test_strand ... ok [INFO] [stdout] test formats::gff::strand::tests::test_default ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_from_u32_with_invalid_op ... ok [INFO] [stdout] test formats::bam::sequence::tests::test_complement_with_invalid_symbol ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 54 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests noodles [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test src/formats/fastq/record.rs - formats::fastq::record::Record::clear (line 76) ... ok [INFO] [stdout] test src/formats/gff/attributes.rs - formats::gff::attributes::Attributes::new (line 14) ... ok [INFO] [stdout] test src/formats/gff/attributes.rs - formats::gff::attributes::Attributes::get (line 32) ... ok [INFO] [stdout] test src/formats/fastq/record.rs - formats::fastq::record::Record::new (line 15) ... ok [INFO] [stdout] test src/formats/gff/attributes.rs - formats::gff::attributes::Attributes::iter (line 50) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "a1944621787bcc1f2a31c8b68398616bcca12f355769856781c847e6905031da"` [INFO] running `"docker" "rm" "-f" "a1944621787bcc1f2a31c8b68398616bcca12f355769856781c847e6905031da"` [INFO] [stdout] a1944621787bcc1f2a31c8b68398616bcca12f355769856781c847e6905031da