Dec 14 13:14:15.332 INFO testing yacrd-0.4.1 against master#bd47d6825bf4090517549d33cfef10d3300b4a75 for pr-56550
Dec 14 13:14:15.332 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56550/worker-6/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-56550/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +bd47d6825bf4090517549d33cfef10d3300b4a75-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Dec 14 13:14:15.778 INFO [stdout] e492a1e71e6d5ee9b858dc31bfc43a2ad22eca11b28fa1b5ab83e8938f60c2f3
Dec 14 13:14:15.783 INFO running `"docker" "start" "-a" "e492a1e71e6d5ee9b858dc31bfc43a2ad22eca11b28fa1b5ab83e8938f60c2f3"`
Dec 14 13:14:16.871 INFO [stderr] usermod: no changes
Dec 14 13:14:17.223 INFO [stderr]    Compiling serde v1.0.82
Dec 14 13:14:17.223 INFO [stderr]    Compiling lzma-sys v0.1.12
Dec 14 13:14:17.223 INFO [stderr]    Compiling csv-core v0.1.4
Dec 14 13:14:17.226 INFO [stderr]    Compiling ndarray v0.9.1
Dec 14 13:14:21.222 INFO [stderr]    Compiling xz2 v0.1.6
Dec 14 13:14:32.054 INFO [stderr]    Compiling csv v1.0.2
Dec 14 13:14:32.054 INFO [stderr]    Compiling bv v0.7.4
Dec 14 13:14:32.054 INFO [stderr]    Compiling multimap v0.4.0
Dec 14 13:14:32.054 INFO [stderr]    Compiling vec_map v0.8.1
Dec 14 13:14:32.054 INFO [stderr]    Compiling serde_json v1.0.33
Dec 14 13:14:34.816 INFO [stderr]    Compiling clap v2.32.0
Dec 14 13:14:35.759 INFO [stderr]    Compiling bio v0.21.0
Dec 14 13:14:56.672 INFO [stderr]    Compiling yacrd v0.4.1 (/source)
Dec 14 13:15:05.024 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 48.09s
Dec 14 13:15:05.033 INFO [stderr] su: No module specific data is present
Dec 14 13:15:05.492 INFO running `"docker" "inspect" "e492a1e71e6d5ee9b858dc31bfc43a2ad22eca11b28fa1b5ab83e8938f60c2f3"`
Dec 14 13:15:05.579 INFO running `"docker" "rm" "-f" "e492a1e71e6d5ee9b858dc31bfc43a2ad22eca11b28fa1b5ab83e8938f60c2f3"`
Dec 14 13:15:05.736 INFO [stdout] e492a1e71e6d5ee9b858dc31bfc43a2ad22eca11b28fa1b5ab83e8938f60c2f3
Dec 14 13:15:05.801 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56550/worker-6/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-56550/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +bd47d6825bf4090517549d33cfef10d3300b4a75-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Dec 14 13:15:06.059 INFO [stdout] 981050f2232f864040be7ab4fa3df08a93d568d2934f1bb5b4a72a57c72d5b7d
Dec 14 13:15:06.059 INFO running `"docker" "start" "-a" "981050f2232f864040be7ab4fa3df08a93d568d2934f1bb5b4a72a57c72d5b7d"`
Dec 14 13:15:06.466 INFO [stderr] usermod: no changes
Dec 14 13:15:06.595 INFO [stderr]    Compiling yacrd v0.4.1 (/source)
Dec 14 13:15:15.207 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 8.72s
Dec 14 13:15:15.215 INFO [stderr] su: No module specific data is present
Dec 14 13:15:15.780 INFO running `"docker" "inspect" "981050f2232f864040be7ab4fa3df08a93d568d2934f1bb5b4a72a57c72d5b7d"`
Dec 14 13:15:16.012 INFO running `"docker" "rm" "-f" "981050f2232f864040be7ab4fa3df08a93d568d2934f1bb5b4a72a57c72d5b7d"`
Dec 14 13:15:16.238 INFO [stdout] 981050f2232f864040be7ab4fa3df08a93d568d2934f1bb5b4a72a57c72d5b7d
Dec 14 13:15:16.244 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56550/worker-6/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-56550/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +bd47d6825bf4090517549d33cfef10d3300b4a75-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Dec 14 13:15:16.611 INFO [stdout] 272e6ec77078c59f6ede6d0ed8fe2007a2e62fe8b8baa4ea8c2758db68f0b69c
Dec 14 13:15:16.612 INFO running `"docker" "start" "-a" "272e6ec77078c59f6ede6d0ed8fe2007a2e62fe8b8baa4ea8c2758db68f0b69c"`
Dec 14 13:15:17.464 INFO [stderr] usermod: no changes
Dec 14 13:15:17.611 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 0.12s
Dec 14 13:15:17.626 INFO [stderr]      Running /target/debug/deps/yacrd-f12226bdf686d31d
Dec 14 13:15:17.630 INFO [stdout] 
Dec 14 13:15:17.630 INFO [stdout] running 32 tests
Dec 14 13:15:17.630 INFO [stdout] test chimera::test::formating_gap ... ok
Dec 14 13:15:17.631 INFO [stdout] test chimera::test::mapping2read2mapping ... ok
Dec 14 13:15:17.633 INFO [stdout] test chimera::test::find_not_covered ... ok
Dec 14 13:15:17.634 INFO [stdout] test chimera::test::find_chimera_cov_1 ... ok
Dec 14 13:15:17.639 INFO [stdout] test chimera::test::notcovered_overlap_extremity ... ok
Dec 14 13:15:17.640 INFO [stdout] test file::test::compression_from_input_or_cli ... ok
Dec 14 13:15:17.640 INFO [stdout] test chimera::test::find_chimera_json_output ... ok
Dec 14 13:15:17.640 INFO [stdout] test chimera::test::find_chimera_mhap_min_mers_float ... ok
Dec 14 13:15:17.640 INFO [stdout] test chimera::test::notcovered_prior_to_chimera ... ok
Dec 14 13:15:17.640 INFO [stdout] test file::test::compression_from_file ... ok
Dec 14 13:15:17.640 INFO [stdout] test chimera::test::find_chimera ... ok
Dec 14 13:15:17.640 INFO [stdout] test io::mhap::test::write ... ok
Dec 14 13:15:17.640 INFO [stdout] test io::mhap::test::read ... ok
Dec 14 13:15:17.640 INFO [stdout] test postdetection::fasta::test::extracted ... ok
Dec 14 13:15:17.640 INFO [stdout] test io::paf::test::write_sam_field ... ok
Dec 14 13:15:17.640 INFO [stdout] test io::paf::test::write ... ok
Dec 14 13:15:17.640 INFO [stdout] test io::paf::test::read ... ok
Dec 14 13:15:17.640 INFO [stdout] test postdetection::fasta::test::fasta_shorter_than_position ... ok
Dec 14 13:15:17.640 INFO [stdout] test postdetection::fastq::test::extracted ... ok
Dec 14 13:15:17.640 INFO [stdout] test postdetection::fasta::test::split ... ok
Dec 14 13:15:17.640 INFO [stdout] test postdetection::fastq::test::fastq ... ok
Dec 14 13:15:17.640 INFO [stdout] test io::paf::test::read_sam_field ... ok
Dec 14 13:15:17.640 INFO [stdout] test utils::test::filename_based ... ok
Dec 14 13:15:17.640 INFO [stdout] test postdetection::fastq::test::filtred ... ok
Dec 14 13:15:17.641 INFO [stdout] test postdetection::fasta::test::filtred ... ok
Dec 14 13:15:17.641 INFO [stdout] test utils::test::filename_mapping_only ... ok
Dec 14 13:15:17.641 INFO [stdout] test utils::test::filename_based_compressed ... ok
Dec 14 13:15:17.646 INFO [stdout] test postdetection::mhap::test::extracted ... ok
Dec 14 13:15:17.657 INFO [stdout] test postdetection::mhap::test::filtred ... ok
Dec 14 13:15:17.657 INFO [stdout] test postdetection::paf::test::extracted ... ok
Dec 14 13:15:17.657 INFO [stdout] test postdetection::paf::test::filtred ... ok
Dec 14 13:15:17.659 INFO [stdout] test postdetection::test::out_name ... ok
Dec 14 13:15:17.659 INFO [stdout] 
Dec 14 13:15:17.659 INFO [stdout] test result: ok. 32 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
Dec 14 13:15:17.659 INFO [stdout] 
Dec 14 13:15:17.663 INFO [stderr] su: No module specific data is present
Dec 14 13:15:18.107 INFO running `"docker" "inspect" "272e6ec77078c59f6ede6d0ed8fe2007a2e62fe8b8baa4ea8c2758db68f0b69c"`
Dec 14 13:15:18.218 INFO running `"docker" "rm" "-f" "272e6ec77078c59f6ede6d0ed8fe2007a2e62fe8b8baa4ea8c2758db68f0b69c"`
Dec 14 13:15:18.349 INFO [stdout] 272e6ec77078c59f6ede6d0ed8fe2007a2e62fe8b8baa4ea8c2758db68f0b69c